Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0106 ATGGGTTCTAAATCCCAAGTCCTATTGAACCCACAAGCTTTGTTTGAAGATCATCAAGATCATGAAGTGGCAGCAAATTCTCAAATGGGTTTCTTCAATTTCCCTTCAAACTTAACTTTTTTCCAACTTCCTTCAGTTCCTCAAACCCATTCTCCTTCCCCTCCATTTGATCCTCCAAATTTCTCCATTTCTAGTAATAATACTAATAATAATAACAATAATAGTAATTCCAATCTCAACGAAACCCTAATTTCTTCTTCTCTTTTGCCCCTCAAGCCCTCCCTTTCCTATGAATTTGCACCTCAACACCTCCTTTCCTTGCAAACATCCACTCCAAATCTATGGCCATGGGGAGAGATTGGAGAAAAGTTGATGAATGGGAAGAGATCAAATAATGAGAATCATCAATTGGGAGTGTCAACAATGAAGATGAAGAAAATGAAAGGAAGAAGAAAAGTGAGAGAACCAAGATTCTCATTCAAGACCATGAGCGATGTTGATGTTCTTGATGATGGTTACAAATGGCGAAAATACGGACAGAAAGTGGTAAAAAACACACAACATCCTAGAAGCTATTATCGTTGTACACAAGATCACTGTAGGGTAAAGAAACGAGTAGAAAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACATGTTCATTCTCCTTCCCATGATTCTGAAGACTCTGAAGCTCAAACCCATCTCAATAATTTCTTTTGGTAA 741 37.79 MGSKSQVLLNPQALFEDHQDHEVAANSQMGFFNFPSNLTFFQLPSVPQTHSPSPPFDPPNFSISSNNTNNNNNNSNSNLNETLISSSLLPLKPSLSYEFAPQHLLSLQTSTPNLWPWGEIGEKLMNGKRSNNENHQLGVSTMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFW 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1104626 1106606 - CePI673135_02g001060.1 Cec02g0106 195159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0106 246 FunFam WRKY transcription factor 57 155 229 - -
Cec02g0106 246 ProSiteProfiles WRKY domain profile. 164 229 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0106 246 MobiDBLite consensus disorder prediction 60 78 - -
Cec02g0106 246 Gene3D WRKY domain 156 222 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0106 246 SMART WRKY_cls 169 228 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0106 246 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0106 246 SUPERFAMILY WRKY DNA-binding domain 161 228 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0106 246 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 50 232 IPR044810 GO:0003700(InterPro)
Cec02g0106 246 MobiDBLite consensus disorder prediction 45 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0106 Cec-Chr2:1104626 Cec04g1276 Cec-Chr4:32367030 2.00E-46 dispersed
Cec02g0106 Cec-Chr2:1104626 Cec02g0109 Cec-Chr2:1164261 1.20E-19 proximal
Cec05g0011 Cec-Chr5:140102 Cec02g0106 Cec-Chr2:1104626 8.60E-32 transposed
Cec02g0106 Cec-Chr2:1104626 Cec04g1283 Cec-Chr4:32469933 3.50E-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28962 PF03106 WRKY 4.20E-24 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0106 - - - 0.0