Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0121 ATGGCTTCTTCAAATTCCATCTCTCTTCTCACATTTCTCACTTTCCTCTTCCTCCTCTCTTCTTCATCTTCCGCTGTCGTTCCAACCGCAGAGATTTGCCAATCCACCGCCTCCCCGTCCTTCTGCAACTCTTTCATTCCCAACTCCCCGGCCTCAGTCCACTCCCATTGCCGCTTCACTCTCCGCAATGCCCTCGACCATGCACATGCCTTCTTGGCACTCGTCGACTCTCACCTCAGCCTTTTCCCCTCCCTCTCCGCCCTCCACGACTGCCGTGGCCTCGCGGAAGCCAACCTCGACTTCATATCCCAAACTTTTTCCATAGTCAACTCCACAGCCATGGTCCTTCCTTATTACCAAGCCCATGAGATGGTGTCCTTAATGAGTGCAATGATCACCAATGAAGACACTTGTTATGACGGGTTGACGGGTTTAGGCTCGGCCTTGGGCTTGGTTGATAAGGTGTTGGAGGCCATCTCTTTTGATAGAAAGCTATATAGTTTGTACCTTTCGTTGTTCAAAATGGGTTGGGTTTCTGAGGACATGAAGGCTCCTATGTTGCCAAATATGAACCATTTTGGGGTCGGGAAAGGGCAGTTGAAGCTTAAAATGTCGCCAAAAGACCGAGCGTATTATGAGCGCTTGGTGCATAGGACGAAGCCGGCGGCCGCTAGAAGGCTTCTTCAGACCAATTACCAAGATGATGGAATTTTAATCAATGGCATGGTTGCGGTGGATCAAACTGGAGCATACGATTTTACAACCATCAGCGACGCCATTGCGGCCGCTCCGAACAAGTCCTCTGTCGCTGACGGATACTTCTTGATCTTCGTGACCGCTGGGATTTACAATGAGAGTGTGTTGGTCCCAAAATATAAAAGGTATGTGTTGATGATCGGAGAAGGTAACAACCAAACTATCATCACCGGCAACAAAAACGTCATTGATGGTTCCACCACTTTCAATAGCGCAACCGTTGTCGTGGAGGGAACAGGGTTTTTCGGAGTAAACCTAACGATCAGCAACACGGCCGGCGCCGCCAAACACCAAGCGGTGGCATTGCGAGTGAGTGCCGACAATGTAACATTATATAGTTGCATATTCGAAGGCTATCAAGACACTCTCTACACACACTCCCTCCGTCAATTCTATAGAGAATGTGATATCTATGGTACTGTCGACTTCATCTTCGGCAATGCTGCAGTCGTTTTGCAAAACTGCAACCTTTACGCCCGTCTCCCAATGAGTGGCCAGTTCAACGCCCTCACGGCGCAGGGCCGAACCGACCCCAATCAGAACACCGGAACCTCCATCCACAACTGCACCATCAAGCCGACGTCGGAGCTCGCGGCGAGCCCCGCCACGAAGAGCTACTTAGGGCGGCCGTGGAAGGAATATTCTCGGACAATTTATATGCAATCGTTTATTGATTCCTTTATTGATCCTGCAGGCTGGAAGGAGTGGGACGGCACTTTGAATTTAAACACTTCTTATTACGCCGAGTTTAATAACTCAGGGCCGGGCTCCGACACTTCACGGCGGGCTTCGTGGGTGGTCGGTGTCATCAACGCCACTGTTGCTAGTAACTTCACAGTGTCTCAATTCTTGGCTGGGGATCAATGGCTACCGCCTACCGCCGTGCCCTACACCGGTGGTTTGATATCATAA 1668 50.42 MASSNSISLLTFLTFLFLLSSSSSAVVPTAEICQSTASPSFCNSFIPNSPASVHSHCRFTLRNALDHAHAFLALVDSHLSLFPSLSALHDCRGLAEANLDFISQTFSIVNSTAMVLPYYQAHEMVSLMSAMITNEDTCYDGLTGLGSALGLVDKVLEAISFDRKLYSLYLSLFKMGWVSEDMKAPMLPNMNHFGVGKGQLKLKMSPKDRAYYERLVHRTKPAAARRLLQTNYQDDGILINGMVAVDQTGAYDFTTISDAIAAAPNKSSVADGYFLIFVTAGIYNESVLVPKYKRYVLMIGEGNNQTIITGNKNVIDGSTTFNSATVVVEGTGFFGVNLTISNTAGAAKHQAVALRVSADNVTLYSCIFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYARLPMSGQFNALTAQGRTDPNQNTGTSIHNCTIKPTSELAASPATKSYLGRPWKEYSRTIYMQSFIDSFIDPAGWKEWDGTLNLNTSYYAEFNNSGPGSDTSRRASWVVGVINATVASNFTVSQFLAGDQWLPPTAVPYTGGLIS 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1297745 1301240 + CePI673135_02g001210.1 Cec02g0121 195174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0121 555 PANTHER PECTINESTERASE 12 544 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec02g0121 555 CDD PMEI-like_3 32 177 - -
Cec02g0121 555 Pfam Pectinesterase 243 539 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec02g0121 555 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Cec02g0121 555 FunFam Pectinesterase 238 553 - -
Cec02g0121 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 175 IPR035513 -
Cec02g0121 555 SMART PMEI_2 22 172 IPR006501 GO:0004857(InterPro)
Cec02g0121 555 Pfam Plant invertase/pectin methylesterase inhibitor 31 167 IPR006501 GO:0004857(InterPro)
Cec02g0121 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
Cec02g0121 555 Gene3D - 239 553 IPR012334 -
Cec02g0121 555 SUPERFAMILY Pectin lyase-like 240 552 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0121 Cec-Chr2:1297745 Cec11g1504 Cec-Chr11:29244139 1.30E-146 dispersed
Cec02g0121 Cec-Chr2:1297745 Cec09g0544 Cec-Chr9:4669231 4.60E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0121 K01051 - csv:101216984 936.021