Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0160 ATGTATATAGGCCAAAGGTCTTTATCCTCCTTGTTTAAGCATCTAAATCATATCCTCGTCTGTTGGACGTCATCGTCTCCAAAATATGCAATTCGCAAAAGTGAAGTGAATTCTTCAGTGAGAGTCAAAAATGGTGTATGTGAAAGCGGAAGGTTGTTGATCATTGGCTATAGAATCACACCATCTGGACCATCAAAGAACGTGCAATCGACGAAAGTCTTCTGTGGGTCTCTCTTCTTCCAATTAAAAAAGCGAAAGAGAAGTAGTGAAATGGTGGCCAAAAGAAGTGTCAAGAACTTGGTCACCATCAGCTGGTTTGCAGAGGTTTTGACGTCTTTTTTTCTTTTGTACTCATTTGTGTTTTTAATTTCTGTCGTTAATTGCTTTTCTAAAGATATCTTAGAGTTTAAGAGTTGCATAAGTGATGAGAGAGGGGATACTCTTGTATCGGCAGGATCGAGATTCGAACTTGGATTCTTTAAGCCATATAGCAGCTCTCATAGCAGAAGATACTTGGGAATATGGTATTACAAATCAAATCCAAGTACGGTTGTTTGGGTTGCCAATCGAGACAGCCCACTTGCAGGTTCAGATGGTATCTTTAAGATTGAGGATGATGGCAACCTCAAAGTATATGATGGAAATCGGAATCTGTATTGGTCAACAAACATTGGAAGTTCTGTACTCGATCGAAGGACTCTGAAGTTATTGGATAATGGAAATCTGGTCTTGAGTTATGCAGATCAAGAAGACTTGTCTGAGCACATCCTCTGGCAGAGTTTTGATTACCCAACTGATACATTTCTTCCTGGCATGTTAATGGATGATAACTTGGTGCTGACTTCATGGAAGAGCTATGATGACCCGGCTCAAGGGAACTTCACTTTTCAGCTAGATCAAGACGGAGGTCAATATGTCATTTGGAAAAGATCAGTTAAATTCTGGAAAAGTGGAGTTTCAGGTAAGTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCAAAAACTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATATTGATACAAGGCTAGTATTGAACAGCTCAGGTCAGCTTCATTATCTAAACTGGGAAGATCACAAAGTGTGGTCTCAGATTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTATAATGCGTGTGGAGATTTTGCTAGCTGTAATAGTGAGGGTGGTGTAGCTTGCAAATGCCTGCCTGGTTTTGAACCTACCTCTCCAGGGAGTTGGAATACTGGAGATTATTCAGGTGGATGCATTAGGAAATCACCAATATGCAGTGTCAACGATGACAGTGACACTTTTTTGAGTCTAAAGATGATGAAAGCTGGAAACCCGGACTTCCAGTTTAATGCGAAGGATGACTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCAGTGTCAGGCTTACTCATATTTGGAAGCTAATACGTCAAGGCAGGGTTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAGTTTGATAATGGCCGTGACCTCAATGTTCGAGTAGCAGTTAGAGATCTAGAATCAACTGTCAGAAACTGTGGAACATGTGGGACAAACCTCATTCCTTATCCACTTAGCACAGGACCTAAATGTGGTGACCCCATGTACTTCAATTTTAACTGCAATGTGGCTACTGGCCAGGTAAACTTTGAAGCAGCAGGTGGAACATACAAGGTTAAATTCATTGATTCAGAAGCGCGGAAATTTTACATTCAAACCAAAGAAGCTGGTGATTGTGGTGATAAAAATTGGATAACCAAAGCCCTTCAACTGAACCAATCATCTCCTTTCCATGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCCGAGAATTTTTCTCTGAAAACCAGCAATGAAGTTGAAATCAGTTGGGAGCTTCCGTTAGAGCCAACTTGTTCTTCAACTACGGACTGCAAAGACTGGCCTTATTCAACTTGCAACATGAGTAAAGATGGAAATAAAAGATGCCTTTGCATGGCAGACTTTCATTGGAATGGATGGAGCTTGAATTGCACTACAGATCACAACAAAGGAAAGGATGGAAGAGGCAAAACGACCTTCTCTGTGATTATTGTTGCAACATCCATTTGTCTTGTCCTTCTGATGATTCTCTCATGTACTGTGTTTTATATTTACTTCTCCAAAACTGGGCTCATTGAAAGACAAGAAAGCAGGGGAAACAGCCAAAAAGATTTAATGCTTCACTTGTACGACAATGAGAGACGTGTCAAAGACCTGATCGAATCGGGTCGATTCAAGGAAGATGATACAAATGGAATAGACATTCCATTTTTTGATTTGGAAACAATTCTAATTGCAACAGAGAACTTCTCAAATGCAAATAAGCTTGGACAAGGAGGCTTTGGGCCAGTTTACAAGGGCAAGTTTCCTAGTGGGCAGGAGATTGCTGTAAAGAGGCTCTCAAGTGGTTCAGGACAAGGCTTTGAGGAGTTTAAGAATGAGGTTTTGTTAATCGCGAAACTTCAGCATCGAAATCTCGTTAGACTTTTGGGCTACTGTGTTGAAGGAGATGAAAAGATGTTGCTTTACGAATATATGCCAAATAAAAGCTTAGACGCCTTTATATTTGATCAAAAGCTGAGTGTGGCATTGGATTGGGACATTCGCTTCAACGTCATTTTGGGAATTGCTCGTGGCCTTCTTTATTTACACCAAGATTCGAGGTTGAGAATTATTCATAGAGATTTGAAGACGAGCAACATTCTTCTAGATGAGGAGATGAATCCCAAAATATCCGACTTTGGCTTGGCGAGGATCTTTGGAGGGAAAGAAACTGCCACAAATACCAAAAGGGTGGTAGGCACTTATGGATACATGTCACCAGAATATGCATTGGATGGCATATTTTCTGTCAAATCTGACGTCTTTAGCTTCGGTGTAGTCGTAATCGAGATCATTAGTGGAAAAAGGAACACGGGATTCTATCACTTGGAGAAAGCTTTGAGTCTTCTAGGCTATGCTTGGGATTTATGGATGAAAGACGAAGGCTTGGATTTAATGGAGCAAACACTGAGGGGGAATTGCAAAAGAGATGAATATTTGAAGTGTTTAAATGTGGGGCTGTTGTGTGTGCAGGAAGATCCATGGGATCGACCCACCATGTCGAATGTGGTCTTCATGCTCGGCAGCGAAACCGCAACTCTTCCATCTCCGAAACCACCAGCTTTCGTTGTACGGCGGTGCCCCTCGAGCAGAGCTTCCTCCTCCACCAAACCAGAAACCTTCTCCCATAATGAGTTGACGGTCACCTTAAAAGATGGTAGATAG 3366 41.5 MYIGQRSLSSLFKHLNHILVCWTSSSPKYAIRKSEVNSSVRVKNGVCESGRLLIIGYRITPSGPSKNVQSTKVFCGSLFFQLKKRKRSSEMVAKRSVKNLVTISWFAEVLTSFFLLYSFVFLISVVNCFSKDILEFKSCISDERGDTLVSAGSRFELGFFKPYSSSHSRRYLGIWYYKSNPSTVVWVANRDSPLAGSDGIFKIEDDGNLKVYDGNRNLYWSTNIGSSVLDRRTLKLLDNGNLVLSYADQEDLSEHILWQSFDYPTDTFLPGMLMDDNLVLTSWKSYDDPAQGNFTFQLDQDGGQYVIWKRSVKFWKSGVSGKFITTDKMPAALLYLLSNFSSKTVPNFSVPHLTSSLYIDTRLVLNSSGQLHYLNWEDHKVWSQIWVEPRDRCSVYNACGDFASCNSEGGVACKCLPGFEPTSPGSWNTGDYSGGCIRKSPICSVNDDSDTFLSLKMMKAGNPDFQFNAKDDFDCKLECLNNCQCQAYSYLEANTSRQGSACWIWSGDLNNLQDEFDNGRDLNVRVAVRDLESTVRNCGTCGTNLIPYPLSTGPKCGDPMYFNFNCNVATGQVNFEAAGGTYKVKFIDSEARKFYIQTKEAGDCGDKNWITKALQLNQSSPFHVTSWCNFKETNPENFSLKTSNEVEISWELPLEPTCSSTTDCKDWPYSTCNMSKDGNKRCLCMADFHWNGWSLNCTTDHNKGKDGRGKTTFSVIIVATSICLVLLMILSCTVFYIYFSKTGLIERQESRGNSQKDLMLHLYDNERRVKDLIESGRFKEDDTNGIDIPFFDLETILIATENFSNANKLGQGGFGPVYKGKFPSGQEIAVKRLSSGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKLSVALDWDIRFNVILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETATNTKRVVGTYGYMSPEYALDGIFSVKSDVFSFGVVVIEIISGKRNTGFYHLEKALSLLGYAWDLWMKDEGLDLMEQTLRGNCKRDEYLKCLNVGLLCVQEDPWDRPTMSNVVFMLGSETATLPSPKPPAFVVRRCPSSRASSSTKPETFSHNELTVTLKDGR 1121
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1585626 1595334 + CePI673135_02g001600.1 Cec02g0160 195213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0160 1121 CDD B_lectin 145 264 IPR001480 -
Cec02g0160 1121 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 768 878 - -
Cec02g0160 1121 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 126 261 - -
Cec02g0160 1121 Gene3D Transferase(Phosphotransferase) domain 1 879 1081 - -
Cec02g0160 1121 SUPERFAMILY alpha-D-mannose-specific plant lectins 184 289 IPR036426 -
Cec02g0160 1121 Pfam PAN-like domain 443 511 IPR003609 -
Cec02g0160 1121 MobiDBLite consensus disorder prediction 1096 1114 - -
Cec02g0160 1121 SMART blect_4 137 264 IPR001480 -
Cec02g0160 1121 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 131 1088 - -
Cec02g0160 1121 ProSiteProfiles Protein kinase domain profile. 803 1081 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0160 1121 Pfam S-locus glycoprotein domain 315 422 IPR000858 GO:0048544(InterPro)
Cec02g0160 1121 CDD PAN_AP_plant 443 527 - -
Cec02g0160 1121 Pfam D-mannose binding lectin 183 280 IPR001480 -
Cec02g0160 1121 Pfam Domain of unknown function (DUF3403) 1076 1121 IPR021820 GO:0004674(InterPro)
Cec02g0160 1121 CDD STKc_IRAK 809 1074 - -
Cec02g0160 1121 ProSiteProfiles Bulb-type lectin domain profile. 133 257 IPR001480 -
Cec02g0160 1121 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 879 1082 - -
Cec02g0160 1121 ProSiteProfiles PAN/Apple domain profile. 443 527 IPR003609 -
Cec02g0160 1121 MobiDBLite consensus disorder prediction 1096 1121 - -
Cec02g0160 1121 SUPERFAMILY Protein kinase-like (PK-like) 787 1104 IPR011009 -
Cec02g0160 1121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0160 1121 Gene3D Phosphorylase Kinase; domain 1 768 878 - -
Cec02g0160 1121 Pfam Protein tyrosine and serine/threonine kinase 806 1071 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0160 1121 SMART serkin_6 803 1047 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0160 1121 SMART ntp_6 447 526 IPR003609 -
Cec02g0160 1121 Gene3D - 134 261 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0160 Cec-Chr2:1585626 Cec03g0526 Cec-Chr3:5523302 3.20E-168 dispersed
Cec02g0155 Cec-Chr2:1554754 Cec02g0160 Cec-Chr2:1585626 3.30E-106 proximal
Cec01g1650 Cec-Chr1:31162003 Cec02g0160 Cec-Chr2:1585626 7.00E-99 transposed
Cec02g1180 Cec-Chr2:27763691 Cec02g0160 Cec-Chr2:1585626 2.80E-176 transposed
Cec02g0160 Cec-Chr2:1585626 Cec03g0514 Cec-Chr3:5419790 3.90E-94 wgd
Cec02g0160 Cec-Chr2:1585626 Cec04g1949 Cec-Chr4:37796211 6.70E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71718 PF07714 PK_Tyr_Ser-Thr 2.30E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0160 - - - 0.0