Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0186 ATGCTTGTATCATCTTTTTCGAACATCGTTGGAGCAAAAAAATTGGCGGTCGGATTTTATCGGGGTAGCTGCCCGGGGGTGGAGTATATTGTTGCCAGAACAGTAGCTCAATATATTAAGAAACAACCAACTCTTGCTGCTTCTTTGTTGAGAATACACTTCCATGACTGCTTTGTTAGGGGTTGTGATGGTTCTGTGCTACTAAATTCCAAACCAAACAACCAAGCTGAGAAGGATTCTTTTCCCAACCTTAGTTTAAGAGGTTTTAATGTCGTTGACGCTGTTAAAGCTGCTGTCGAAAAGCAATGCCCCGGTGTCGTTTCTTGTGCTGATATTCTCGCTTTGATAGCTCGCGACGCCGTTAGAATGATTGGAGGGCCGCTGTGGGAAGTTCCAACAGGAAGAAGAGATGGAAGAGTATCCATCTCCAAAGAAGCGATCACCACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCTAAACTAGACAAATACTACGCCATCGCACTCAAGAACAAATGCAAGCCAAATGACCAGAAAACCATCGTCGAGATGGATCTTGGAAGCTCCAAGACCTTCGATCGAGGTTACTACGCTCTCGTCTCCAAGAGAAGAGGATTGTTCCAGTCCGATTCCGCTCTTCTCGACGATCCTAATACCAAAGCTTACGTATTGCTTCAGGCAAGTACACGCGGCGCTACTTTCGCCGTTGATTTCGCTATATCCATGGTGAATATGGGGAATATCGGTGTCCTCACCGGCACCGACGGTGAAATTAGGCGGCGATGTGCTTTTGTTAACTGA 843 46.98 MLVSSFSNIVGAKKLAVGFYRGSCPGVEYIVARTVAQYIKKQPTLAASLLRIHFHDCFVRGCDGSVLLNSKPNNQAEKDSFPNLSLRGFNVVDAVKAAVEKQCPGVVSCADILALIARDAVRMIGGPLWEVPTGRRDGRVSISKEAITTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAIALKNKCKPNDQKTIVEMDLGSSKTFDRGYYALVSKRRGLFQSDSALLDDPNTKAYVLLQASTRGATFAVDFAISMVNMGNIGVLTGTDGEIRRRCAFVN 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1766797 1769325 - CePI673135_02g001860.1 Cec02g0186 195239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0186 280 Gene3D Peroxidase, domain 2 148 259 - -
Cec02g0186 280 Gene3D - 18 146 - -
Cec02g0186 280 SUPERFAMILY Heme-dependent peroxidases 15 280 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Haem peroxidase superfamily signature 107 124 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Haem peroxidase superfamily signature 125 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 Gene3D - 260 280 - -
Cec02g0186 280 ProSiteProfiles Plant heme peroxidase family profile. 14 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Plant peroxidase signature 87 100 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 PRINTS Plant peroxidase signature 125 140 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 CDD secretory_peroxidase 14 279 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec02g0186 280 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601(InterPro)
Cec02g0186 280 FunFam Peroxidase 18 161 - -
Cec02g0186 280 Pfam Peroxidase 149 240 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 Pfam Peroxidase 31 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0186 280 FunFam Peroxidase 146 259 - -
Cec02g0186 280 PANTHER PEROXIDASE 25-RELATED 16 146 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0186 Cec-Chr2:1766797 Cec02g0880 Cec-Chr2:10974651 1.10E-74 dispersed
Cec02g0185 Cec-Chr2:1760371 Cec02g0186 Cec-Chr2:1766797 3.80E-82 tandem
Cec02g0186 Cec-Chr2:1766797 Cec02g0187 Cec-Chr2:1775551 2.50E-138 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0186 K00430 - csv:101219177 466.463