Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0190 ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCGTCTGTTCGTCTCCGGATTCACATCTTTTTCTCCCGATTTGAGCACAACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTTCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGCCATTCGGTTTTACGCTCTTCGTCTCCGGATTCACACCTTTTTCTCTTGGGTTAGGGTTTCTCTTTTGTGCTTGCTTGTATTGTTTTTTCTGTTTCTGGGATCGAACCGCAAGATCCGTTTATTTTCTGGGATTTTTGGGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAGTTTCATACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATTCACGGTTTCTAA 897 44.04 MSRRINYEILSAPSVRLRIHIFFSRFEHNPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHAIRFYALRLRIHTFFSWVRVSLLCLLVLFFLFLGSNRKIRLFSGIFGELNLRAHNLFAGYLCSTPDSQVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1790671 1796834 + CePI673135_02g001900.1 Cec02g0190 195243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0190 298 FunFam Eukaryotic translation initiation factor SUI1 17 129 - -
Cec02g0190 298 SUPERFAMILY eIF1-like 30 127 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec02g0190 298 CDD eIF1_SUI1 214 297 IPR005874 GO:0003743(InterPro)
Cec02g0190 298 ProSiteProfiles Translation initiation factor SUI1 family profile. 47 117 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec02g0190 298 FunFam Eukaryotic translation initiation factor SUI1 190 298 - -
Cec02g0190 298 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 197 298 - GO:0003723(PANTHER)
Cec02g0190 298 Gene3D - 188 298 - -
Cec02g0190 298 Gene3D - 18 129 - -
Cec02g0190 298 CDD eIF1_SUI1 45 127 IPR005874 GO:0003743(InterPro)
Cec02g0190 298 Pfam Translation initiation factor SUI1 44 118 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec02g0190 298 Pfam Translation initiation factor SUI1 213 287 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec02g0190 298 SUPERFAMILY eIF1-like 185 298 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec02g0190 298 ProSiteProfiles Translation initiation factor SUI1 family profile. 216 286 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cec02g0190 298 NCBIfam translation initiation factor SUI1 196 298 IPR005874 GO:0003743(InterPro)
Cec02g0190 298 NCBIfam translation initiation factor SUI1 28 128 IPR005874 GO:0003743(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0190 Cec-Chr2:1790671 Cec10g0514 Cec-Chr10:6199372 2.50E-40 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0190 K03113 - csv:101219651 202.986