Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0212 ATGGCCTGGACCCGACGATCCGCCGTCGGAAACGGCTCATCCGCCACCGTCTACCTCGCCTCCATCGCCTCCTCCGGCGAGCTATTCGCCGTCAAGTCCGCCGAGCTTCTCAAATCAGACTTCTTGAAAACAGAGCAGAGGATTCTTTCTTCCCTTTCCCACCCTTCAATTGTGGGCTACAGGGGATTCGATGTAACGACAGAAAATGGGAAGCTAATGTACAATCTCTTCATGGAGTACGTCGCCGGTGGCACTCTTACCGAAGAAATTGTCCGACGCGGCGGCAGGATTAAGGAGGTGGCGGCGGCGTTTTACACGCGTCAAATTGTTAGAGGTTTGGAGTACTTGCACAAACAGGGCTTGGTGCATTGTGATATCAAAGCTAAGAACATTTTAATCGGTGGAGTTGGTTTGAAGATTGCTGATTTCGGTTGCTCCAAATGGGTTTCTGAGACGGAGGCGGTAATCGGCGGAACGCCGATGTTCATGGCACCGGAAGTGGCGCGTGGGGAAAAACAGGGGATTTCCTCTGACATATGGGCACTTGGGTGTACTTTAATCGAAATGGTCACCGGCGCTCCACCATGGCCCATCTCCGGCGACCCTGTTTCGGTGCTGTACCGGATCGGATATTCCGGCGAATCGCCGGCAATTCCGAGTTTTCTATCGGAGAAAGCGAAGGATTTTTTAAGGAAATGCTTGAGAAGGGACCCAACAGAAAGATGGAGCGCGAATCAACTTCTTGAACATCCATTTTTTGGGGAATTGAGTTCTGGGTTGGAGGAAATCAAGGAATTACATCCACATTCGGAATCTCCGACGAGTATTTTGGATCAAAGCCTCTGGAATTCGTTAGAAGAAGAATCAGAAACTCTGTTGAAAACAGAGCAATGGGATGACGACGATGACCACGACGACGACAGAATCAAAGGGCTGGCGATGTTTTCAGGAGAAATTAAATGGGAACTGGGAGATGAGAATTGGATCACAATCAGAAGCTGTGTAGATAGTGAAGATGAAGAAGAATCCAATTTTAGAAGAAATGATTTAGACTTAGTGGAACAGGAAAGAATAGGTAGTGGGAAAATCCAGTGTTTGGAATTGTTAGATAAAACAGTTAGCTTTAGAGTAAGGAAAAGTAATATTCTAATTAGTGAAATTAGTACCAACATTGGACAAATCTAA 1185 46.92 MAWTRRSAVGNGSSATVYLASIASSGELFAVKSAELLKSDFLKTEQRILSSLSHPSIVGYRGFDVTTENGKLMYNLFMEYVAGGTLTEEIVRRGGRIKEVAAAFYTRQIVRGLEYLHKQGLVHCDIKAKNILIGGVGLKIADFGCSKWVSETEAVIGGTPMFMAPEVARGEKQGISSDIWALGCTLIEMVTGAPPWPISGDPVSVLYRIGYSGESPAIPSFLSEKAKDFLRKCLRRDPTERWSANQLLEHPFFGELSSGLEEIKELHPHSESPTSILDQSLWNSLEEESETLLKTEQWDDDDDHDDDRIKGLAMFSGEIKWELGDENWITIRSCVDSEDEEESNFRRNDLDLVEQERIGSGKIQCLELLDKTVSFRVRKSNILISEISTNIGQI 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2047538 2048722 - CePI673135_02g002120.1 Cec02g0212 195265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0212 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0212 394 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0212 394 SUPERFAMILY Protein kinase-like (PK-like) 6 272 IPR011009 -
Cec02g0212 394 Gene3D Transferase(Phosphotransferase) domain 1 2 310 - -
Cec02g0212 394 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0212 394 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
Cec02g0212 394 CDD STKc_MAPKKK 3 253 - -
Cec02g0212 394 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 253 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cec02g0212 394 SMART serkin_6 3 253 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0212 Cec-Chr2:2047538 Cec04g1378 Cec-Chr4:33426970 3.30E-56 dispersed
Cec09g1076 Cec-Chr9:10487751 Cec02g0212 Cec-Chr2:2047538 4.80E-86 transposed
Cec02g0212 Cec-Chr2:2047538 Cec02g0926 Cec-Chr2:12204173 2.30E-97 wgd
Cec02g0212 Cec-Chr2:2047538 Cec04g1887 Cec-Chr4:37408096 8.10E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71719 PF00069 Pkinase 1.60E-57 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0212 K20716 - csv:101205351 629.017