Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g0213 | ATGGACGCCGCCGCACCTTCCCCTTCCCCTCCTCTGCCTACTCCCACTCCCCTGCAATTTCCGGTTAACCTCAATTCCACCCTCCCCGATCCCCACGATTCTCCTCCTCCTCCGCCTCCTCCTCCCCCTCCGCCACCCCCTCCTCCTCCACCCTCCTCCTCCCACCGCCCCTTCTTCGACGAAATGAACTTCTTCCCTGCCGATGATAAATCCCGCGTCCTTCTCTCTGCCTCTCACTCCAATCTCACTCCCACCAAACTCGACTTCAATGTTAACACGGGGTTGAATCTCTTGACCACGAATTCGTGTAGCGATCAATCCATGGTGGACGATGGAGTTTCACCAAACCCAGAAGAAAAAAGAATAAAAAACGAGAGAGCAGTTCTTCAAGCTGAATTGGAGAGGATAAACTCGGAGAATCTACGATTAAAAGACATGTTAAATCAAGTGACGAGCAATTACCAAACACTGCAGATGCAATTCAACACGCTAATTCAAACCCAGAAAACAGGGGACGCCGGTGACCCGATTGAGGAAAACGCCGGCAGTGGCGGAGGGAATAATAATAATAATAATAATAATATTGGTAATAAGCTGGTGCCCAGGCAATTTATGGATCTTGGATTAGCAACCAATATGGAGAACGATGAGCCGTCAATGTCGTCGTCGGAAGGGAGGAGTGGGGAGCGGTCCCGGTCGCCAGGAACCACCGGAGAAGTAGCGTCGTCGAAACGGCATAGCCCAGATCAATCTTCCAATTGGGGTTCCAATAATAACAACAACAACAACAATAATAAAGTTCCAAAATTCAGTTCTTCTTCGGGTAAAGATGTGGATCAAACTGAAGCTACCATGAGAAAGGCTAGAGTCTCCGTTCGAGCCAGATCAGAAGCCCCCATGATAACAGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAGGGAAACCCTTGTCCACGAGCTTATTACCGGTGCACCATGGCCGCCGGCTGCCCAGTTAGAAAACAAGTACAAAGATGTGCAGAAGACAAAACAATTTTGATAACAACCTACGAAGGAAACCACAACCACCCATTGCCGCCGGCCGCCATGGCAATGGCTTCCACAACTTCATCGGCGGCCAGAATGCTTCTCTCAGGATCCATGTCAAGTGCAGATGGTTTAATGAACTCTAATTTTTTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACGATCTCAGCCTCAGCCCCATTTCCCACGGTCACATTGGACCTAACTCAAAACCCTAATCCTTTGTTCCAACGCCCGGCCGCGGGTCACTTCCCGATCCCGTTTGCGGCCGGTCCGCCACAAAGCTTCCCGCAGATCTTCGGACATGCATTATACAATCAATCAAAATTCTCAGGCCTTCAAATGTCAAAGGATATTGAAGCACCACCACCTCCACCATCGCAGAATCCATTGGCCGACACATTGAGTGCGGCGGGTGTAGCAATCGCATCCGACCCTAATTTCATTGCGGCATTGGCAACGGCAATGACGTCGCTGATCGGCGGATCGCATCATCAGAATGAGAATGGTAATGGCGGTAGTAATGTTGATAACAATACAAATAGCAACTCCCAACAGTAA | 1626 | 49.26 | MDAAAPSPSPPLPTPTPLQFPVNLNSTLPDPHDSPPPPPPPPPPPPPPPPPSSSHRPFFDEMNFFPADDKSRVLLSASHSNLTPTKLDFNVNTGLNLLTTNSCSDQSMVDDGVSPNPEEKRIKNERAVLQAELERINSENLRLKDMLNQVTSNYQTLQMQFNTLIQTQKTGDAGDPIEENAGSGGGNNNNNNNNIGNKLVPRQFMDLGLATNMENDEPSMSSSEGRSGERSRSPGTTGEVASSKRHSPDQSSNWGSNNNNNNNNNKVPKFSSSSGKDVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLMNSNFLARTLLPCSSSMATISASAPFPTVTLDLTQNPNPLFQRPAAGHFPIPFAAGPPQSFPQIFGHALYNQSKFSGLQMSKDIEAPPPPPSQNPLADTLSAAGVAIASDPNFIAALATAMTSLIGGSHHQNENGNGGSNVDNNTNSNSQQ | 541 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2062376 | 2065593 | - | CePI673135_02g002130.1 | Cec02g0213 | 195266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Cec02g0213 | 541 | SUPERFAMILY | WRKY DNA-binding domain | 294 | 362 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec02g0213 | 541 | ProSiteProfiles | WRKY domain profile. | 296 | 362 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec02g0213 | 541 | FunFam | probable WRKY transcription factor 31 | 286 | 363 | - | - | |
Cec02g0213 | 541 | Gene3D | WRKY domain | 286 | 363 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 518 | 541 | - | - | |
Cec02g0213 | 541 | Coils | Coil | 119 | 153 | - | - | |
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 213 | 295 | - | - | |
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 182 | 198 | - | - | |
Cec02g0213 | 541 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 109 | 522 | IPR044810 | GO:0003700(InterPro) | |
Cec02g0213 | 541 | SMART | WRKY_cls | 301 | 361 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 170 | 198 | - | - | |
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cec02g0213 | 541 | Pfam | WRKY DNA -binding domain | 303 | 360 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec02g0213 | 541 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 40 | 46 | - | - | |
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 30 | 55 | - | - | |
Cec02g0213 | 541 | MobiDBLite | consensus disorder prediction | 214 | 279 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0213 | Cec-Chr2:2062376 | Cec06g1830 | Cec-Chr6:31720774 | 1.10E-36 | dispersed | |
Cec05g1163 | Cec-Chr5:10549420 | Cec02g0213 | Cec-Chr2:2062376 | 4.90E-41 | transposed | |
Cec02g0213 | Cec-Chr2:2062376 | Cec04g1884 | Cec-Chr4:37382114 | 1.30E-114 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28977 | PF03106 | WRKY | 2.50E-24 | CL0274 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g0213 | - | - | - | 0.0 |