Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0213 ATGGACGCCGCCGCACCTTCCCCTTCCCCTCCTCTGCCTACTCCCACTCCCCTGCAATTTCCGGTTAACCTCAATTCCACCCTCCCCGATCCCCACGATTCTCCTCCTCCTCCGCCTCCTCCTCCCCCTCCGCCACCCCCTCCTCCTCCACCCTCCTCCTCCCACCGCCCCTTCTTCGACGAAATGAACTTCTTCCCTGCCGATGATAAATCCCGCGTCCTTCTCTCTGCCTCTCACTCCAATCTCACTCCCACCAAACTCGACTTCAATGTTAACACGGGGTTGAATCTCTTGACCACGAATTCGTGTAGCGATCAATCCATGGTGGACGATGGAGTTTCACCAAACCCAGAAGAAAAAAGAATAAAAAACGAGAGAGCAGTTCTTCAAGCTGAATTGGAGAGGATAAACTCGGAGAATCTACGATTAAAAGACATGTTAAATCAAGTGACGAGCAATTACCAAACACTGCAGATGCAATTCAACACGCTAATTCAAACCCAGAAAACAGGGGACGCCGGTGACCCGATTGAGGAAAACGCCGGCAGTGGCGGAGGGAATAATAATAATAATAATAATAATATTGGTAATAAGCTGGTGCCCAGGCAATTTATGGATCTTGGATTAGCAACCAATATGGAGAACGATGAGCCGTCAATGTCGTCGTCGGAAGGGAGGAGTGGGGAGCGGTCCCGGTCGCCAGGAACCACCGGAGAAGTAGCGTCGTCGAAACGGCATAGCCCAGATCAATCTTCCAATTGGGGTTCCAATAATAACAACAACAACAACAATAATAAAGTTCCAAAATTCAGTTCTTCTTCGGGTAAAGATGTGGATCAAACTGAAGCTACCATGAGAAAGGCTAGAGTCTCCGTTCGAGCCAGATCAGAAGCCCCCATGATAACAGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAGGGAAACCCTTGTCCACGAGCTTATTACCGGTGCACCATGGCCGCCGGCTGCCCAGTTAGAAAACAAGTACAAAGATGTGCAGAAGACAAAACAATTTTGATAACAACCTACGAAGGAAACCACAACCACCCATTGCCGCCGGCCGCCATGGCAATGGCTTCCACAACTTCATCGGCGGCCAGAATGCTTCTCTCAGGATCCATGTCAAGTGCAGATGGTTTAATGAACTCTAATTTTTTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACGATCTCAGCCTCAGCCCCATTTCCCACGGTCACATTGGACCTAACTCAAAACCCTAATCCTTTGTTCCAACGCCCGGCCGCGGGTCACTTCCCGATCCCGTTTGCGGCCGGTCCGCCACAAAGCTTCCCGCAGATCTTCGGACATGCATTATACAATCAATCAAAATTCTCAGGCCTTCAAATGTCAAAGGATATTGAAGCACCACCACCTCCACCATCGCAGAATCCATTGGCCGACACATTGAGTGCGGCGGGTGTAGCAATCGCATCCGACCCTAATTTCATTGCGGCATTGGCAACGGCAATGACGTCGCTGATCGGCGGATCGCATCATCAGAATGAGAATGGTAATGGCGGTAGTAATGTTGATAACAATACAAATAGCAACTCCCAACAGTAA 1626 49.26 MDAAAPSPSPPLPTPTPLQFPVNLNSTLPDPHDSPPPPPPPPPPPPPPPPPSSSHRPFFDEMNFFPADDKSRVLLSASHSNLTPTKLDFNVNTGLNLLTTNSCSDQSMVDDGVSPNPEEKRIKNERAVLQAELERINSENLRLKDMLNQVTSNYQTLQMQFNTLIQTQKTGDAGDPIEENAGSGGGNNNNNNNNIGNKLVPRQFMDLGLATNMENDEPSMSSSEGRSGERSRSPGTTGEVASSKRHSPDQSSNWGSNNNNNNNNNKVPKFSSSSGKDVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLMNSNFLARTLLPCSSSMATISASAPFPTVTLDLTQNPNPLFQRPAAGHFPIPFAAGPPQSFPQIFGHALYNQSKFSGLQMSKDIEAPPPPPSQNPLADTLSAAGVAIASDPNFIAALATAMTSLIGGSHHQNENGNGGSNVDNNTNSNSQQ 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2062376 2065593 - CePI673135_02g002130.1 Cec02g0213 195266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0213 541 MobiDBLite consensus disorder prediction 1 58 - -
Cec02g0213 541 SUPERFAMILY WRKY DNA-binding domain 294 362 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0213 541 ProSiteProfiles WRKY domain profile. 296 362 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0213 541 FunFam probable WRKY transcription factor 31 286 363 - -
Cec02g0213 541 Gene3D WRKY domain 286 363 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0213 541 MobiDBLite consensus disorder prediction 518 541 - -
Cec02g0213 541 Coils Coil 119 153 - -
Cec02g0213 541 MobiDBLite consensus disorder prediction 213 295 - -
Cec02g0213 541 MobiDBLite consensus disorder prediction 182 198 - -
Cec02g0213 541 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 109 522 IPR044810 GO:0003700(InterPro)
Cec02g0213 541 SMART WRKY_cls 301 361 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0213 541 MobiDBLite consensus disorder prediction 170 198 - -
Cec02g0213 541 MobiDBLite consensus disorder prediction 1 18 - -
Cec02g0213 541 Pfam WRKY DNA -binding domain 303 360 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0213 541 SUPERFAMILY Formin homology 2 domain (FH2 domain) 40 46 - -
Cec02g0213 541 MobiDBLite consensus disorder prediction 30 55 - -
Cec02g0213 541 MobiDBLite consensus disorder prediction 214 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0213 Cec-Chr2:2062376 Cec06g1830 Cec-Chr6:31720774 1.10E-36 dispersed
Cec05g1163 Cec-Chr5:10549420 Cec02g0213 Cec-Chr2:2062376 4.90E-41 transposed
Cec02g0213 Cec-Chr2:2062376 Cec04g1884 Cec-Chr4:37382114 1.30E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28977 PF03106 WRKY 2.50E-24 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0213 - - - 0.0