Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0232 ATGGCACAGTTGCCACCCAAAATCCCAAATATGACGCCTAATTGGCCCGAATTTTCCCGGCAGAAAATCCCTTCAATGGAAACCTTTGCACCGCCCACCACCACGCCGGCGGTTACTCAAAACAATCCTTCTTGGGTCGATGAATTTCTCGATTTTTCTTCTGCTAGACGTGGATCCCACCGTCGGTCTGTTAGTGATTCCATCACATTCCTCGAAATGCCAATGCTCGAGGAAGATTGCCGGACTGCCGCTGCTGCACCGCCCCCGCCGCCCCCGGGATCCGGTGACCGGAATGAATTTGATAGATTCGATGACGAGCAATTCCTGTCGATGTTTAATGATGAAATCTCCGCCGCCGTCGCTCCCACCTTGTCGTCGTCGAACCCCTCCACGCCGTCGGATCATAATAGTATTAACGACGAGAAAGACGCCCAAAACGACGGTAAGCAAAATCAGAACAAAAACGAATCCGACGAAGTACAGAGCCAACAGCAATCGGAAAACCAAACACAATCCAATTCCATGGCGACGGCGGCAATGGCGGCTTCCTCTGATCGGATAACAGACCCCAAAAGAGTCAAAAGAATTCTGGCAAATCGGCAATCGGCACAAAGATCACGAGTAAGGAAGCTTCAATACATATCAGAACTCGAACGAAGCGTTACATCTTTACAGGCTGAAGTATCGGTGCTATCGCCGCGAGTGGCGTTTTTGGACCACCAGAGATTGCTTCTTAACGTCGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCACAGGATAAGATTTTTAAAGATGCTCATCAGGAGGCATTAAAAAGGGAGATAGAGAGACTAAGACAAGTATATCACCAACAAAACGTTAAGAAGATGGAAAACAATGCAGCACCATCACCGGCGATTACTCCGTCCCAACACGTCACCGCCATCGCCACAGATGCCAAACTTCCTAACATAGATCAAAACGAGCAAGTTCCAAACGTCGTCGTTTAG 996 49.1 MAQLPPKIPNMTPNWPEFSRQKIPSMETFAPPTTTPAVTQNNPSWVDEFLDFSSARRGSHRRSVSDSITFLEMPMLEEDCRTAAAAPPPPPPGSGDRNEFDRFDDEQFLSMFNDEISAAVAPTLSSSNPSTPSDHNSINDEKDAQNDGKQNQNKNESDEVQSQQQSENQTQSNSMATAAMAASSDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNVKKMENNAAPSPAITPSQHVTAIATDAKLPNIDQNEQVPNVVV 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2226325 2229442 - CePI673135_02g002320.1 Cec02g0232 195285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0232 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0232 331 SMART brlzneu 187 251 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0232 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 241 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0232 331 Pfam Basic region leucine zipper 188 236 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0232 331 Coils Coil 270 290 - -
Cec02g0232 331 SUPERFAMILY Leucine zipper domain 191 245 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0232 331 CDD bZIP_plant_RF2 192 242 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0232 331 MobiDBLite consensus disorder prediction 136 154 - -
Cec02g0232 331 MobiDBLite consensus disorder prediction 79 101 - -
Cec02g0232 331 Gene3D - 190 289 - -
Cec02g0232 331 MobiDBLite consensus disorder prediction 122 192 - -
Cec02g0232 331 PANTHER BASIC LEUCINE ZIPPER 34 1 304 IPR052483 GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Cec02g0232 331 FunFam Basic leucine zipper 61 190 263 - -
Cec02g0232 331 MobiDBLite consensus disorder prediction 155 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0232 Cec-Chr2:2226325 Cec11g1818 Cec-Chr11:32365332 4.50E-54 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28981 PF07716 bZIP_2 4.10E-09 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0232 - - - 0.0