Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0250 ATGCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTCTCCATTGGTTTGTTCCCTCAATCAAGAAGGACTATATCTTCAGCGAGTCAAACTCGGTCTCTCCGATCCCACTCACTCCCTCTCTTCATGGAACCCACGCGACGACACTCCCTGCAACTGGTCCGGCGTTACTTGCGATTCCGTTACTCGTTCTGTTATCGCCCTCGACCTCTCCGATTTTCAGATCGCCGGACAGTTTCCCACTTTCGTTTGTCGTCTTCCTTCTCTTTCTTCACTAGCTCTTTCCAATAACGCTATTAACGCTTCTCTTCCTGACGATGTCGCTTCCTGTTCTAGCCTCCAGTGGCTTAACTTGTCTCAGAATTTTCTTGCTGGTTCTATTCCCGATGCGATTTCCAAGATCTCGAATCTTCGCTCACTGGATCTCTCTGGAAACAACTTTTCCGGGGAGATTCCGACAAGTTTCGGTGGGTTTCAGCGACTTGAGACGCTGAATTTAGTTGATAATCTTTTGGATGGAACTATTCCGGGGAGTTTGGGTAACATTTCGAGTTTGAAAGAGCTTCAACTCGCTTACAATCCGTTTACGCGGAGTGAGATACCGAGTGCATTCGGGAACTTGACGAACCTGGAGGTTCTCTGGCTTGCTAACTGTAACCTTGTCGGTCAGATTCCGGCAACTGTTGGCCGGATGACTCGGCTTACGAATCTTGACTTGTCCAATAATAGACTCAGTGGGTCGATTCCGGTTTCACTCACTCAAATGAAAAGTTTAGTTCAAATTGAACTATTTAACAACTCGCTCTCCGGGGAGTTGCCTTTGGGACTGTCTAATTTAACTGCACTTCGAAGAATTGATGTGTCGATGAATCACTTGACTGGAACAATTCCGGATGAACTGTGTGCATTACAGCTTGAGTCGCTAAATTTGTTCGAGAATCGATTGGAAGGGCCTTTGCCGGAGAGTATCGTTAATTCCCCTTACTTGAATGAGCTCAAATTGTTTAACAACAAGCTTAGTGGACAGTTACCGAGTAAACTCGGCCAAAACTCGCCATTAGTGCATCTTGATGTTTCATACAACGGATTTTCTGGCGGAATCCCTGAAAACTTGTGTGCAAAAGGGACATTGGAAGAACTTATATTGATTTACAATTCGTTTTCCGGAAGAATCCCGGCAAGTCTTGGAAAATGCAGCAGCTTAAGCCGGATTCGAATGAGGAACAACAGACTCTCGGGTGCGGTTCCTGATGAATTCTGGGGTCTGCCCAATGTCTATTTGCTTGAGCTCGTTGAGAATTATCTTTCTGGGTCTATTTCTTCGATGATATCTAGCGCTAAGAATCTCTCTATTTTGATGATCTCAGAAAATCAATTTTCAGGGTTAATTCCTTCCGAGATTGGGTCGTTAAGCAATCTGACTGAACTTTCAGGTAGTGACAATATGTTTTCCGGTCGAATCCCGGGAACTTTGGTAAAGTTAAACTTGTTGAGTACACTCGATCTAAGCAAGAACAAACTTTCTGGTGAATTGCCAATGGGAATTGGAGCTTTGAAAAGGCTAAACGAGTTAAATTTAGCAAACAACAGGCTATCTGGCAATATCCCGAGTGAAATTGGAAGCCTACCTGTGCTTAATTATCTCGATCTTTCAAGTAACCATCTCAGTGGAAGTATACCCCTTGAATTGCAGAATTTGAAACTGAATTCGCTAAATCTGTCGAACAATCGGTTATCAGGAGTACTTCCTCCTGTTTATGCAGAGGATATTTACAGAGATAGCTTTCTGGGTAATCCAGGTTTGTGCAATAACGACCCAAGTCTTTGTCCTCATGTTGGAAAAGGCAAAAACCAAGGCTATTGGCTTCTCAGATCCATTTTTCTACTTGCTGCCATTGTTTTTTTTGTTGGGGTCATTTGGTTTTTCTTGAAGTACAAGGAATTCAAGAAGAGTAAAAAAGGAATTGCCATGTCCAAGTGGAAATCATTTCATAAGCATGGTTTTAGTGAATATGAAATAGCAGATTGCCTCAGTGAAGACAAAGTCATTGGAAGTGGAGCATCTGGCAAAGTGTACAAAGTTGTGCTAAAAAACGGCGAGATCGTGGCGGTGAAGAAGCTATGGCAAGGAGCAAGAAAAGAGGACACAAGTTTGGATTCAGAGAAAGATGGATTTGAAGCTGAAGTTGAGACTTTAGGGAAGATCCGTCACAAGAATATTGTAAGGTTATGGTGCTGCTGCAACACAGGCAACTGCAAGCTGCTTGTTTATGAGTACATGCCTAATGGAAGCTTGGGAGATTTGTTGCACGGCAGCAAAAAGCGCTTTCTGGATTGGCCTACAAGGTATAAAGTAGTTTTGGATGCAGCTGAAGGGCTTTCTTACTTGCATCACGACTGTGCTCCTCCAATTGTTCATAGGGATATTAAATCCAACAATATATTGCTTGATTCTGAGTTTGGAGCTAGAGTTGCTGACTTTGGATTGGCAAAGTTTTTGAACGCTGGCAAGGGATCAGAATCAATGTCTGTCATTGCCGGTTCTTGTGGTTATATTGCACCAGAATATGCTTATACTTTAAGAGTAAACGAAAAGAGTGACATCTACAGCTTTGGGGTGGTGATTTTAGAGCTAGTGACAGGGAGGCCTCCAAATGATCCAGAATTTGGGGATAGAGACTTGGCAAAGTGGGTCTATGCCACCGTCGATGGTAGAGGACTCGATCGAGTGATTGATCCGAAACTCGGTTCTGAATACAAGGAAGAAATATACAGAGTCCTTGACGTGGGACTGCTTTGCACAAGCTCACTTCCCATCAACCGCCCTTCAATGAGACGAGTCGTTAAACTGCTGCAGGAGGCTGCCACAGAAACCAGACCCGCCATTGTTAAAAAGGAACCCAAACTTTCTCCATATTTCTCCTAG 2934 43.49 MPSLLLLLLLLLLLSSPLVCSLNQEGLYLQRVKLGLSDPTHSLSSWNPRDDTPCNWSGVTCDSVTRSVIALDLSDFQIAGQFPTFVCRLPSLSSLALSNNAINASLPDDVASCSSLQWLNLSQNFLAGSIPDAISKISNLRSLDLSGNNFSGEIPTSFGGFQRLETLNLVDNLLDGTIPGSLGNISSLKELQLAYNPFTRSEIPSAFGNLTNLEVLWLANCNLVGQIPATVGRMTRLTNLDLSNNRLSGSIPVSLTQMKSLVQIELFNNSLSGELPLGLSNLTALRRIDVSMNHLTGTIPDELCALQLESLNLFENRLEGPLPESIVNSPYLNELKLFNNKLSGQLPSKLGQNSPLVHLDVSYNGFSGGIPENLCAKGTLEELILIYNSFSGRIPASLGKCSSLSRIRMRNNRLSGAVPDEFWGLPNVYLLELVENYLSGSISSMISSAKNLSILMISENQFSGLIPSEIGSLSNLTELSGSDNMFSGRIPGTLVKLNLLSTLDLSKNKLSGELPMGIGALKRLNELNLANNRLSGNIPSEIGSLPVLNYLDLSSNHLSGSIPLELQNLKLNSLNLSNNRLSGVLPPVYAEDIYRDSFLGNPGLCNNDPSLCPHVGKGKNQGYWLLRSIFLLAAIVFFVGVIWFFLKYKEFKKSKKGIAMSKWKSFHKHGFSEYEIADCLSEDKVIGSGASGKVYKVVLKNGEIVAVKKLWQGARKEDTSLDSEKDGFEAEVETLGKIRHKNIVRLWCCCNTGNCKLLVYEYMPNGSLGDLLHGSKKRFLDWPTRYKVVLDAAEGLSYLHHDCAPPIVHRDIKSNNILLDSEFGARVADFGLAKFLNAGKGSESMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRPPNDPEFGDRDLAKWVYATVDGRGLDRVIDPKLGSEYKEEIYRVLDVGLLCTSSLPINRPSMRRVVKLLQEAATETRPAIVKKEPKLSPYFS 977
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2357656 2360879 - CePI673135_02g002500.1 Cec02g0250 195303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0250 977 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0250 977 FunFam Leucine-rich receptor-like protein kinase family protein 203 301 - -
Cec02g0250 977 Pfam Protein kinase domain 682 891 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0250 977 SUPERFAMILY RNI-like 71 368 - -
Cec02g0250 977 FunFam Receptor-like protein kinase HSL1 663 762 - -
Cec02g0250 977 Gene3D Phosphorylase Kinase; domain 1 662 762 - -
Cec02g0250 977 Gene3D Ribonuclease Inhibitor 21 199 IPR032675 -
Cec02g0250 977 ProSiteProfiles Protein kinase domain profile. 680 965 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0250 977 SUPERFAMILY L domain-like 356 606 - -
Cec02g0250 977 Gene3D Transferase(Phosphotransferase) domain 1 763 971 - -
Cec02g0250 977 SUPERFAMILY Protein kinase-like (PK-like) 673 954 IPR011009 -
Cec02g0250 977 ProSiteProfiles Leucine-rich repeat profile. 236 258 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 PRINTS Leucine-rich repeat signature 545 558 - -
Cec02g0250 977 PRINTS Leucine-rich repeat signature 237 250 - -
Cec02g0250 977 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524(InterPro)
Cec02g0250 977 SMART LRR_typ_2 185 209 IPR003591 -
Cec02g0250 977 SMART LRR_typ_2 137 160 IPR003591 -
Cec02g0250 977 SMART LRR_typ_2 282 306 IPR003591 -
Cec02g0250 977 SMART LRR_typ_2 234 258 IPR003591 -
Cec02g0250 977 SMART LRR_typ_2 521 545 IPR003591 -
Cec02g0250 977 SMART LRR_typ_2 89 113 IPR003591 -
Cec02g0250 977 FunFam Receptor-like protein kinase HSL1 307 614 - -
Cec02g0250 977 Gene3D Ribonuclease Inhibitor 200 260 IPR032675 -
Cec02g0250 977 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Cec02g0250 977 PANTHER RECEPTOR-LIKE PROTEIN 55 380 954 - -
Cec02g0250 977 Pfam Leucine Rich Repeat 187 210 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 500 520 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 236 257 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 548 569 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 451 473 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 570 587 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 212 233 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 356 375 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 307 328 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 285 306 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Pfam Leucine Rich Repeat 163 184 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 185 - -
Cec02g0250 977 Pfam Leucine rich repeat 90 150 IPR001611 GO:0005515(InterPro)
Cec02g0250 977 Gene3D Ribonuclease Inhibitor 266 615 IPR032675 -
Cec02g0250 977 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 763 971 - -
Cec02g0250 977 SMART serkin_6 680 976 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0250 Cec-Chr2:2357656 Cec03g0616 Cec-Chr3:6581015 4.20E-169 dispersed
Cec08g1244 Cec-Chr8:24384480 Cec02g0250 Cec-Chr2:2357656 1.10E-79 transposed
Cec11g0894 Cec-Chr11:11881397 Cec02g0250 Cec-Chr2:2357656 7.30E-07 transposed
Cec02g0250 Cec-Chr2:2357656 Cec04g2035 Cec-Chr4:38457804 1.50E-134 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71721 PF00069 Pkinase 1.40E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0250 - - - 0.0