Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0284 ATGGTTTCTTCAGGGGACCAGTTAGAGAATGAAGTTGATTCTGATCAATTGGAGCATGAAAACAGTTCAGAAAGTCAACCGCAAACGTCTCAGGACGAGCCTGGTGGAACTAATGCATCAAAATCAGATCACAAATGCACAGGGGCTGCCAGTATTACACTTGAAGAAGCTGTCAAGCAGCCTGAAGTTACAATCGAACAAGTGGATCGAGGAGAAATCTCTAATATAGTGACTGAGAAAGTGACCCATAAGCCCATTACTGCAGACCAGAATTCCCATTCTGATTTGAAAGTATGTATTACCTCTACTATACGAGAGAAAGTATCAGAGGATGGGTATAACTGGCGGAAATATGGTCAGAAACTGGTTAAGGGAAATGTCTTTGTTAGAAGCTATTACAGATGTACGCATCCTACTTGCATGGTGAAAAAACAACTGGAGCGCACTCATGATGGGAAGATCACAGACACTGTTTACTTTGGCCAGCATGATCATCCTAAACCTCAACCTCACATTCCAGTTGCTGTTGGAGTCGTTACCATGGTTGAAGAAAAATTAGATGAACATGCTTCTGGAAATTCTCAAGATAAGACCTCCATTGCGCCTGGCCAGACACCTCATCAAACTGAGCTAGCTGATATGCGTCAAACGTCATCAGTTATGGCCAGTGATAATGTAAAAGATGAAGCTTCGAAAAGGTCTAGGATCAATGATGAGGTTGACAGTGATGATACACCAGACTTGAAACGAGAGAAGAAAAGATGTAATATTGACGTGACAGTAGCAGACAAGTCAACTGTTGAATCTCGGGTTGTTGTTCAAACTCCTAGCGAGGTTGACATCGTCAATGATGGATACCGCTGGCGGAAGTATGGACAGAAATTGGTGAAAGGCAATCCAAATCCTAGGAGTTACTACAGATGCTCAAGTCCTGGATGTCCAGTTAAGAAACATGTAGAGAGGGCGTCTCATGATCCAAAAGTGGTGCTTACCACGTATGAGGGTCAGCATGACCATGATATGCCTCCTACAAGGACGGTGACGTTGAACTCAGTTGGATCCACAGCAGCCCATAGTGATGAGACAAAACCAAAACCGGTCGGTAGTTCCATTGGCCATGATACGGTGGTTCATGCTACTAAGGATTCTCGAAATAATTCAAGTTCTGAAGGCAAATTAATTGAAAAGAATGGCAAGTCGAATGCCACAGAAGCAAGTGATGGCATAGTCCTCGATATGGTGGTCAATCCTAGTCCAGGAGTTGCGAGTGGACAAAATAAGCAGCTTAAAGTAGCAATTGAAAGCTAA 1308 43.27 MVSSGDQLENEVDSDQLEHENSSESQPQTSQDEPGGTNASKSDHKCTGAASITLEEAVKQPEVTIEQVDRGEISNIVTEKVTHKPITADQNSHSDLKVCITSTIREKVSEDGYNWRKYGQKLVKGNVFVRSYYRCTHPTCMVKKQLERTHDGKITDTVYFGQHDHPKPQPHIPVAVGVVTMVEEKLDEHASGNSQDKTSIAPGQTPHQTELADMRQTSSVMASDNVKDEASKRSRINDEVDSDDTPDLKREKKRCNIDVTVADKSTVESRVVVQTPSEVDIVNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVLTTYEGQHDHDMPPTRTVTLNSVGSTAAHSDETKPKPVGSSIGHDTVVHATKDSRNNSSSEGKLIEKNGKSNATEASDGIVLDMVVNPSPGVASGQNKQLKVAIES 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2626157 2628745 + CePI673135_02g002840.1 Cec02g0284 195337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0284 435 Gene3D WRKY domain 94 169 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 FunFam WRKY transcription factor 98 169 - -
Cec02g0284 435 SMART WRKY_cls 109 167 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 SMART WRKY_cls 282 341 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 SUPERFAMILY WRKY DNA-binding domain 104 168 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 Gene3D WRKY domain 269 335 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 MobiDBLite consensus disorder prediction 226 248 - -
Cec02g0284 435 Pfam WRKY DNA -binding domain 110 166 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 Pfam WRKY DNA -binding domain 283 340 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 MobiDBLite consensus disorder prediction 21 47 - -
Cec02g0284 435 SUPERFAMILY WRKY DNA-binding domain 274 342 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 MobiDBLite consensus disorder prediction 1 47 - -
Cec02g0284 435 MobiDBLite consensus disorder prediction 352 406 - -
Cec02g0284 435 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 152 375 IPR044810 GO:0003700(InterPro)
Cec02g0284 435 MobiDBLite consensus disorder prediction 187 248 - -
Cec02g0284 435 MobiDBLite consensus disorder prediction 381 404 - -
Cec02g0284 435 MobiDBLite consensus disorder prediction 193 225 - -
Cec02g0284 435 ProSiteProfiles WRKY domain profile. 277 342 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0284 435 FunFam WRKY transcription factor 57 268 342 - -
Cec02g0284 435 ProSiteProfiles WRKY domain profile. 104 168 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0284 Cec-Chr2:2626157 Cec10g0454 Cec-Chr10:5399467 1.80E-66 dispersed
Cec02g0284 Cec-Chr2:2626157 Cec05g2623 Cec-Chr5:37015293 9.70E-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28984 PF03106 WRKY 2.90E-26 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0284 K18834 - csv:101212482 757.288