Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0325 ATGCCCTACAGCGATAGGCCAACTGAATCTTCATGGGGTCTGGAATTTCCCATTGCCATATCACAAATCTATGGCTCTGTTTCACTTTCATGCGCTCTGAAACTTCTTCTTCTGCTTCCAACTTTGATATTTCGAGTGTGTATTGCTGGTGTATCGGGCAAAATGATCAAAAATAAAAAAAGTTCACTGTTGTGCAAAATATTCCCATTGGAACTTCTTCCTTGCAGTACATTTTGTACACATGCAAGAGAAAAAGATCAGAAAATGGATGAGAAGAGAGAAACCAAAGAGCCATCAAGCTCTAATCTCTCATCTTCTGCTCATCAAATCAGGCCTACAGAGAAGAGGACACCAATTGAAGTCTTTCAATTGCCTGCAAGTTCTGGAGATGGCCATTCCAAGGGGGAGAGTGATGCGACTCATGAGCAGGATGAGGCAAAATCATCCCTCTCTTCCTTTCGTCCTGCTGCCAGCATGGCAGCATCCAGAAAGTGGATGGCATTTGAAAATGAAAACTTTAATATAACAGAAACGTACACAAAGAACTTCAGTGGTAGCTTTGGGTCATATTCTACTGATCTTTTGGAAACAAACATAACAAAAAGGACTGCAGAGGAGAACAAGATTGATCATTTATCACCGCTGCAACTGACATATGTGATCTCAGATGCAACAAAACCAGATTGCCCCATCATGTTTGCCAGCAATAGGTTCTTGGTTATGACTGGCTATACACTGGAGGAGGTCATTGGAAGGAATTGCCGGTTTCTTCAAGGACCAGAAACAGATAAGAATGAAGTCGCCAAAATACGAGATGCAATTAGAAAGGGGAATAGTTACTGTGGCAAGCTCTTGAACTACAAGAAGAATGGTACTCCTTTCTGGAATCTTCTCACTGTTGGGCCTATCAAAGATTCCCATGGCAACATCATCAAATTTATTGGAATGCAGGTTGAGATCGCCAAAAACACAGAAGAAAAAGAGAGAACCATGAAGTCCATGTCCATTACAGAGCTCCAAGCTGTGAAAAGTCTAAGATCTCACATTCAGTCAAAAAGGCATGATGCTGATACAAAGCACGAAGACCAAGAAATGACTGATGCTGATTATGCTCTGTACAAGGCTCTGGATATTGATGAGTATATTAGCACATCTGATAACCAAAAGGCTCGGTTCAAAGAAAGGACTCTAGGTTCTGCAGTAGAACGTGAAGAAAAGACAGTTGTTGAGGCATCTGTTTTCAAGCCCAGGGATGGTGATTGTGTTGCTAAAAGAGAAAGGGACATATGTCAAGGAATTGAGTTGGCTACCACATTGGAACGGATTGAGAAGATATTTTTTATCACTAACCCAAGACTTCCTGATAATCCTATTATATTCGCATCTCATAGGTTTCTTGATTCTACAGAATACTCATGTGAAGAAATTCTGGGGAGAAACTTTTGGTTTCTTCAGGGACCTGAAACAGATCAAGCAACTGTCTCAAAGATAAACAATGCAATTGAAGAGCAGAGAGAAATCACTCTTCAGATAATAAACTATACAAAGAGTGGAAAAAAGTTCTCGAATGTATTCCACTTGCAACCCATGTGGGATCAAAAGAAGGGGGAGCTTCAATATTTCATCGCGGCGCAGCTTCATCTAAAACCTTCAAGAGGCTGGCTTTTAGATCAAACGGAGCATGAAAGTGCTAAGCTGGCCAAAGCTGTAGCTGAGAATGTTGACAAGGCTGTCCGTGAACTTCCTGGTGCCAACTTGAAACCAAAGAACTTCTGGGCAATCTACTGCCAGCCAGTCTTGCCAAGGCCTCACAAGAAGTACAGTCCTTCCTGGATAGCCATACAAAAGATTACCAGTCATAGTGAAAAGATTGGACTCCATCATTTTAAGCCAATAAGACCTCTGGGTTTTGGAGACATTGGCAGTGTTCATCTCGTACAACTAAACGGAACAGGTGAACTCTTTGCTATGAAGGCTATAGAAAAGTCAGTAATATTAAATCGAAACAAGGTTCATCGAGCATGCATGGAAAGGGAAATCATATCACTTCTGGATCATCCTTTCATGCCAACACTATACTCTTCATTTCAGACGCCTACTCACATTTTTCTTATTATGGACTTCTGCCCCGGTGGAGAGTTATTTACATTTCTTGACAAGCAGCCAATGAAAATGTTTAAAGAGGAAGCTGCTAGGTTCTATGCTGCAGAAGTTGTCATTGCTTTGGAGTATCTTCACTGTTTAGGTATTATCTACAGGGACCTAAAACCTGAAAATATTCTACTCCAGAAAGATGGACATATCATCCTCACTGATTTTGATTTATCGTTTAAGACGTCTAGCATACAAACCATAGAATCTTCAACCCCAAGAAAGAAGACATGTAGGCATAAATCACTGCCGATGGTCGTCGTTGAACCTATGGTAGAACTGAATTCATTCATTGGAACTGAAGAGTACATTGCCCCAGAGATCATAATGGGTGCAGGCCATGGTAGCTCTATTGACTGGTGGACTCTAGGTATCTTATTGTATGAAATGCTCTATGGTCGCACTCCCTTCAAAGGCAAAAACAGGAATAAAACTTTTGCCAATATTTTGTGCAAGGACTTGACCTTCCCCATTAGTATTCAGGCAAGTCTTGCAGCAAAACAACTGATTGATGCATTACTACAGAGAGACCCTGCACGTCGTCTAGGATCGAGGACCGGTGCTGATGAAATCAAACGACATCCATTTTTCCGTCAAATAAATTGGCCTAAAATTCGAACCATGACACCACCATCACCAGAAGTAGCCCTTCAAATAATTGAGAGAGATCCAAAAGCTAATGATTTGAAGTGGGAAGATGGAATGCTCAGTCTTTCAATGGGTGCTGCTGATATTTTCTGA 2892 41.22 MPYSDRPTESSWGLEFPIAISQIYGSVSLSCALKLLLLLPTLIFRVCIAGVSGKMIKNKKSSLLCKIFPLELLPCSTFCTHAREKDQKMDEKRETKEPSSSNLSSSAHQIRPTEKRTPIEVFQLPASSGDGHSKGESDATHEQDEAKSSLSSFRPAASMAASRKWMAFENENFNITETYTKNFSGSFGSYSTDLLETNITKRTAEENKIDHLSPLQLTYVISDATKPDCPIMFASNRFLVMTGYTLEEVIGRNCRFLQGPETDKNEVAKIRDAIRKGNSYCGKLLNYKKNGTPFWNLLTVGPIKDSHGNIIKFIGMQVEIAKNTEEKERTMKSMSITELQAVKSLRSHIQSKRHDADTKHEDQEMTDADYALYKALDIDEYISTSDNQKARFKERTLGSAVEREEKTVVEASVFKPRDGDCVAKRERDICQGIELATTLERIEKIFFITNPRLPDNPIIFASHRFLDSTEYSCEEILGRNFWFLQGPETDQATVSKINNAIEEQREITLQIINYTKSGKKFSNVFHLQPMWDQKKGELQYFIAAQLHLKPSRGWLLDQTEHESAKLAKAVAENVDKAVRELPGANLKPKNFWAIYCQPVLPRPHKKYSPSWIAIQKITSHSEKIGLHHFKPIRPLGFGDIGSVHLVQLNGTGELFAMKAIEKSVILNRNKVHRACMEREIISLLDHPFMPTLYSSFQTPTHIFLIMDFCPGGELFTFLDKQPMKMFKEEAARFYAAEVVIALEYLHCLGIIYRDLKPENILLQKDGHIILTDFDLSFKTSSIQTIESSTPRKKTCRHKSLPMVVVEPMVELNSFIGTEEYIAPEIIMGAGHGSSIDWWTLGILLYEMLYGRTPFKGKNRNKTFANILCKDLTFPISIQASLAAKQLIDALLQRDPARRLGSRTGADEIKRHPFFRQINWPKIRTMTPPSPEVALQIIERDPKANDLKWEDGMLSLSMGAADIF 963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2987582 3002167 + CePI673135_02g003250.1 Cec02g0325 195378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0325 963 PANTHER FLIPPASE KINASE 1-RELATED 577 930 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec02g0325 963 CDD PAS 231 320 IPR000014 -
Cec02g0325 963 SUPERFAMILY PYP-like sensor domain (PAS domain) 446 542 IPR035965 -
Cec02g0325 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0325 963 SUPERFAMILY PYP-like sensor domain (PAS domain) 225 318 IPR035965 -
Cec02g0325 963 Gene3D Phosphorylase Kinase; domain 1 628 712 - -
Cec02g0325 963 SMART pas_2 206 275 IPR000014 -
Cec02g0325 963 SMART pas_2 433 502 IPR000014 -
Cec02g0325 963 ProSiteProfiles Protein kinase domain profile. 629 914 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0325 963 FunFam Putative LOV domain-containing protein 713 926 - -
Cec02g0325 963 Gene3D Transferase(Phosphotransferase) domain 1 713 928 - -
Cec02g0325 963 SUPERFAMILY Protein kinase-like (PK-like) 605 940 IPR011009 -
Cec02g0325 963 ProSiteProfiles PAC domain profile. 278 332 IPR000700 -
Cec02g0325 963 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Cec02g0325 963 SMART pac_2 281 323 IPR001610 -
Cec02g0325 963 SMART pac_2 508 551 IPR001610 -
Cec02g0325 963 Gene3D PAS domain 219 377 - -
Cec02g0325 963 ProSiteProfiles PAS repeat profile. 231 277 IPR000014 -
Cec02g0325 963 CDD STKc_phototropin_like 627 928 - -
Cec02g0325 963 CDD PAS 445 540 IPR000014 -
Cec02g0325 963 Pfam PAS domain 453 543 IPR000014 -
Cec02g0325 963 Pfam PAS domain 225 320 IPR000014 -
Cec02g0325 963 Gene3D PAS domain 420 581 - -
Cec02g0325 963 NCBIfam PAS domain S-box protein 231 328 IPR000014 -
Cec02g0325 963 NCBIfam PAS domain S-box protein 457 542 IPR000014 -
Cec02g0325 963 MobiDBLite consensus disorder prediction 134 148 - -
Cec02g0325 963 SMART serkin_6 629 914 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0325 963 MobiDBLite consensus disorder prediction 85 153 - -
Cec02g0325 963 Pfam Protein kinase domain 632 914 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0325 Cec-Chr2:2987582 Cec02g2182 Cec-Chr2:39231636 6.80E-236 dispersed
Cec06g1858 Cec-Chr6:31937018 Cec02g0325 Cec-Chr2:2987582 2.40E-56 transposed
Cec02g0325 Cec-Chr2:2987582 Cec02g1120 Cec-Chr2:24727069 3.20E-270 wgd
Cec02g0325 Cec-Chr2:2987582 Cec04g1828 Cec-Chr4:37009330 1.40E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71722 PF00069 Pkinase 5.90E-63 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0325 K20715 - csv:101213364 1536.16