Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0333 ATGTCCGATTTGAACTCCGCCGTCCACGGCGGCTCCTCTCTTTACGCCGATCAATTTCTCGGTTCAGAGCTCCAACTTCAAAATTTCTCACAAACCCATCTCGCCGATCCCAACAACTCGCTGGAAAGTCACCAGAAAATTCTCAATCCGGCCGATTCAACCACCCCAACTAGCGGCGGTTCGTCCACGCGCCGTTCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATTGTAACACGTGACAGCCCCAATGCTCTGAGATCGCACTTGCTGGAAGTCTCCGCCGGCTCCGATGTGGTCGAATCCGTCTCGAGTTACGCCACGCGCCGCCGTCACGGCCTTTGCATACTCGCCGGCACCGGCGCCGTCACAAACGTCAACTTGCGCCAGCCGGCGGCGCCGTCGGGAACTGTTATGACGCTTCATGGAACGTTTGAGATTGTGTCTCTGACTGGTACGGCGTTGCCACCGCCGGCGCCTCCAGGTGCCGGAGGGATAACTGTTTATTTGTCCGGCGGGCAAGGGCAGGTCGTCGGAGGAAGTGTCGTCGGGCCGTTAACGGCGTCAAGTCCCGTTGTATTGATGGTGGCGTCGTTTACTAATGCGGTGTATGATCGGCTGCCGCTGGACGAGGCGGAGCCGCCGGTGCAAGCTCAGCCATCGGCATCACCATCTTCAGATATTACAGGTGGAGGCGGGCAGCTTGGGGGTATCGGAAGCTTCAACCTGCCCGACGACAATTACGGTTGGAATGGCAATACATCGAGGCCTCCGACGACGCTGTGA 801 59.18 MSDLNSAVHGGSSLYADQFLGSELQLQNFSQTHLADPNNSLESHQKILNPADSTTPTSGGSSTRRSRGRPAGSKNKPKPPVIVTRDSPNALRSHLLEVSAGSDVVESVSSYATRRRHGLCILAGTGAVTNVNLRQPAAPSGTVMTLHGTFEIVSLTGTALPPPAPPGAGGITVYLSGGQGQVVGGSVVGPLTASSPVVLMVASFTNAVYDRLPLDEAEPPVQAQPSASPSSDITGGGGQLGGIGSFNLPDDNYGWNGNTSRPPTTL 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3063953 3066214 - CePI673135_02g003330.1 Cec02g0333 195386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0333 266 CDD DUF296 92 158 IPR005175 -
Cec02g0333 266 MobiDBLite consensus disorder prediction 48 88 - -
Cec02g0333 266 FunFam AT-hook motif nuclear-localized protein 91 220 - -
Cec02g0333 266 Gene3D - 91 220 - -
Cec02g0333 266 ProSiteProfiles PPC domain profile profile. 88 226 IPR005175 -
Cec02g0333 266 MobiDBLite consensus disorder prediction 217 266 - -
Cec02g0333 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 206 IPR005175 -
Cec02g0333 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 44 235 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER)
Cec02g0333 266 MobiDBLite consensus disorder prediction 251 266 - -
Cec02g0333 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 220 - -
Cec02g0333 266 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0333 Cec-Chr2:3063953 Cec02g1771 Cec-Chr2:35542995 1.80E-58 dispersed
Cec02g0333 Cec-Chr2:3063953 Cec06g0035 Cec-Chr6:362714 2.80E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0333 - - - 0.0