Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0350 ATGAGTATGGTTTGGCTTCTTTTAGTACTTGTTTGTATTCAAGGAATTTCAGAAGGGGCCTCAAGAAATGAAGTAGTGAAAGTTGGAGCTATATTTTCACTTAGTTCTGTCAATGGGAAAGTTTCCAAGATTGCCATTGAAGCTGCTGAGAAAGATGTGAATTCTGATCCAAGTGTTCTTGGTGGAAGAAAGCTATCTATTTCCATATATGATGCAAATTATAGTGGATTTCTTGGTATCACAGGAGCAATGAAGTACATGGTGTCTGACACAGTTGCTATCCTTGGTCCACAAGATTCTACAATGGCTCATACACTCTCACATCTTTCTAATGAACTCCATATCCCGTTACTCTCATTTACAGCATTGGACCCAACACTTTCAACTTTGCAATATCCATACTTCATTCAAACAGCTCCAAATGATCATTTCCAAATGACTGCAATTGCTGATATGATTCATTATTACGGTTGGCATGACGTCGTTGTGGTTTTCACCGACGACGATCAATGTCGAAACAGTATGATTGAATTAGGTGATAAACTTGAAGAGAGAAGCTTGAAAATTTCCTCTAAAGTGCCACTCCCCCCTTACCCAACAGCAACAAGAACTCAAGTTCAAGATGCATTGGTAAAGATTAAAATGATGGAATCTCGAGTAATCGTATTGTACACGTTTTCGAAAACCGGTTTCTTGGTTTTCGAAGTGGCTCAAAGCCTTAGAATGATGGGAGCTGGTTATGTTTGGATAACCTCTAGTTGGCTATCAACAGTAATAGATTCTACTTCACCACTTCCTTTGAAAATTGCCAACTCCATCCAAGGAGTTCTTACTCTTCGTCTACACACACCCGATTCGAAAATGAAACGATCTTTTATATCGAGATGGAACAAGCTGAGCAATGGCTCCTCAATTGGGTTGAATACGTATGGCCTATATGCTTATGATACTGTTTGGATGGTTGCAAGAGGAGTGAAAAAGTTATTGGATCAAAATGGAACTATCTCATTCTCCAAAGTTACAAATGCTGGTAATCTTAGTGGAGAGACTTTGGATTTTAGTTCATTGGGAATCTTTAATGAAGGAAATGATTTGCTTAACTATTTATTGAATATCAGTATGACTGGTTTAACAGGGCCTATTAAGTTTCTAGATAAATCCCCTTTACATCCTTCATATGATATCTTAAATGTAGTGAAATCTGGTATGAAGAGAATCGGATATTGGTCTAACTATTCCGGTTTGTCTGTCGTGGCGCCCGAAACGTTGTATGGCAAAGCAATTAATCGTTCTATGTTAACCGAACAGTTAAGCAGCACAATGTGGCCTGGGGGATTGACAACAAAGCCTCGTGGTTGGGTTCTACCACTCGATGGAAGGCGGCTAAGAATCGGCGTTCCACGCAGAGTTAGTTATCAGGAATTCGTGACACCGGGAAATGGAAATGGTACAATCAAAGGATACTGCATTGATGTGTTCACTGCTGCTGTCAACTTGCTTCCATATGCAGTTACTTATGAGTTCATTTTGTTTGGAGATGGTGAGAAGAATCCTAGCTACCTTGAGCTTGTAAATAAAGTTGCATTGAAAGAATTTGATGCTGCTGTTGGTGACATTGCCATTGTGACTAGTCGGACAAGGATTGTCGATTTTACGCAGCCTTATATCGACTCGGGGCTAGTAGTTCTGGCCCCTGTGAAGAAGTTGAATTCAAGTCCTTTGGCATTCCTTCGCCCATTCACACCAATGATGTGGGCTGTCACAGCAGCATTTTTCTTCCTCATTGGATTAGTTGTGTGGATGTTGGAACATCGGAAAAACGACGAATTTCGAGGGCATCCTAGGACGCAAATCGTCACAATCCTCTGGTTTGGCTTCTCTACTATGTTTTTTGCACAAAGAGAAAACGTCGTGAGCACGCTCGGTCGTTTCGTGATAGTCGTGTGGCTTTTTGTGGTTCTAATTATCAACTCGAGCTACACCGCTAACCTGACATCGATATTCACAGTACAACTAGCCACCTCATCTATCACAGGAATCGATTCATTGATATCTAGCAATGTGCATATAGGATTCCAAGTTGGTTCATTTGCTGAAAGTTATTTAAGTGAGCAACTTAATGTCCAAAAGTCTAGGCTCATTGCTCTTGGATCCCCAGAAGAGTATGCTGCCGCTCTCAAGAACGGAACGGTCGGTGCTATTGTCGACGAGCAACCATACATCGATCTCTTTCTCACCGAGTATTGCGATTATTTGATAAGGGGCCAACAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCACGAGACTCTCCGTTGGCGGTAGACTTATCGACCGCCATACTCACACTCTCAGAGAACGGCCATCTTCAGAAGATTCACGACAAGTGGTTCTCAAGAAAATCTTGCAGTTCAGGAGATTTCGATCTAAATTCAGAGCAACTTCACTTGCAGAGCTTCATCGGATTGTTCTCCATTTGTGCCGGCGTGTGTTTGTTCGCTCTTTTGCTTCATTTTTTCTTGACCATGTGTCAATTCAACCGCCATTTGAAGCAAGATCCAGAAGCTTCGACCACCGGTACCGGTGGCGATGGCGGTTCCTGCCCTACGGCGCTGCGAAATTTCTTTTCGTTTGCAGATAAGAAGAAGGAAAGAAAGACGAGCTATTCGAAGAGGAAGGTCGAAGATACATTCTCGAGTGAACGTGGAGAGGATTAG 2718 41.98 MSMVWLLLVLVCIQGISEGASRNEVVKVGAIFSLSSVNGKVSKIAIEAAEKDVNSDPSVLGGRKLSISIYDANYSGFLGITGAMKYMVSDTVAILGPQDSTMAHTLSHLSNELHIPLLSFTALDPTLSTLQYPYFIQTAPNDHFQMTAIADMIHYYGWHDVVVVFTDDDQCRNSMIELGDKLEERSLKISSKVPLPPYPTATRTQVQDALVKIKMMESRVIVLYTFSKTGFLVFEVAQSLRMMGAGYVWITSSWLSTVIDSTSPLPLKIANSIQGVLTLRLHTPDSKMKRSFISRWNKLSNGSSIGLNTYGLYAYDTVWMVARGVKKLLDQNGTISFSKVTNAGNLSGETLDFSSLGIFNEGNDLLNYLLNISMTGLTGPIKFLDKSPLHPSYDILNVVKSGMKRIGYWSNYSGLSVVAPETLYGKAINRSMLTEQLSSTMWPGGLTTKPRGWVLPLDGRRLRIGVPRRVSYQEFVTPGNGNGTIKGYCIDVFTAAVNLLPYAVTYEFILFGDGEKNPSYLELVNKVALKEFDAAVGDIAIVTSRTRIVDFTQPYIDSGLVVLAPVKKLNSSPLAFLRPFTPMMWAVTAAFFFLIGLVVWMLEHRKNDEFRGHPRTQIVTILWFGFSTMFFAQRENVVSTLGRFVIVVWLFVVLIINSSYTANLTSIFTVQLATSSITGIDSLISSNVHIGFQVGSFAESYLSEQLNVQKSRLIALGSPEEYAAALKNGTVGAIVDEQPYIDLFLTEYCDYLIRGQQFTKSGWGFAFPRDSPLAVDLSTAILTLSENGHLQKIHDKWFSRKSCSSGDFDLNSEQLHLQSFIGLFSICAGVCLFALLLHFFLTMCQFNRHLKQDPEASTTGTGGDGGSCPTALRNFFSFADKKKERKTSYSKRKVEDTFSSERGED 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3236449 3242187 - CePI673135_02g003500.1 Cec02g0350 195403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0350 905 Gene3D - 141 415 - -
Cec02g0350 905 Gene3D - 456 572 - -
Cec02g0350 905 Gene3D - 740 805 - -
Cec02g0350 905 FunFam Glutamate receptor 573 703 - -
Cec02g0350 905 PIRSF IGluLR_plant 1 903 IPR017103 -
Cec02g0350 905 FunFam Glutamate receptor 141 299 - -
Cec02g0350 905 FunFam Glutamate receptor 699 802 - -
Cec02g0350 905 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 26 887 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
Cec02g0350 905 SUPERFAMILY Periplasmic binding protein-like I 20 453 IPR028082 -
Cec02g0350 905 Gene3D - 573 714 - -
Cec02g0350 905 FunFam Glutamate receptor 457 573 - -
Cec02g0350 905 Gene3D - 44 390 - -
Cec02g0350 905 Pfam Ligand-gated ion channel 800 830 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Cec02g0350 905 SUPERFAMILY Periplasmic binding protein-like II 438 800 - -
Cec02g0350 905 CDD GluR_Plant 460 798 - -
Cec02g0350 905 SMART GluR_14 463 800 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Cec02g0350 905 Pfam Bacterial extracellular solute-binding proteins, family 3 472 583 IPR001638 -
Cec02g0350 905 MobiDBLite consensus disorder prediction 882 905 - -
Cec02g0350 905 Pfam Receptor family ligand binding region 43 400 IPR001828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0350 Cec-Chr2:3236449 Cec11g1930 Cec-Chr11:33463121 1.50E-277 dispersed
Cec02g0350 Cec-Chr2:3236449 Cec04g1806 Cec-Chr4:36826041 1.60E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0350 K05387 - csv:101208602 1573.53