Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0363 ATGAATGCACATATCAACTCCGTCTCCATTGCCAGTAGTAGCAGCTCTCCTCTCGATCTCGCCATTCCTTTTGAACTTCAAATGATCGAAACTACAACGTCTCTCGACTCCAATCGCCGCCGTCCTCGCAAGAAACGGTCAAGAATAGAAAAAGACTCCACCGTCACCACTGCCGCCGTCTCTTCCAAGGCTAAGTATAGCAAGAAACCCGATCCTAATGCACCCAAGATCACTCCTCCATGTACTGAGTGTGGGAAGAGATTTTGGTCAGATAAAGCGCTTTTCGGTCACATGAGGTGTCATCCTGAACGTCAATGGCGGGGAATTAATCCGCCTCTTAATTTCCGTCGTTCGATTTCTGTTTCTCCTTTTAGCCCTAATATCGCTACTGATTTAGAAGACTCTTCGTTTACTGAAGAAGATCAAGACATTGCTAATTGCTTGCTAATGCTTGCGAATAGCCCTAATTCGATTTCTAGGGTTTCCGATTGTCGATTCGAATGCTCGAGTTGTAAGAAAGTGTTCGGATCGCATCAAGCGCTTGGTGGACATAGGGCAAGTCATAAGAATGTGAGAGGCTGTTTCGCTATCGCAAAGAGCGATGAAGAAACAGAAGATGAAATTACTCTGTTTGGCCATGACAGGAGTATCAATCTGGAGAATAGAATGTCGATGATGATTTTAGGAACAGCAGAGCATAAATGTAGTGGCCACAAGAGATTCCACTGGGAGAATAATGCAGCTGCAGAAGAAGGTTTTGTTAATTTGGACTTGAACATGCCTGCTCCTCTTGAAGATGGTTCATCTTCTTCATATTCTTCAAGCCTCACTCTGGATCTGAGGTTGGGCCTTTGA 855 44.68 MNAHINSVSIASSSSSPLDLAIPFELQMIETTTSLDSNRRRPRKKRSRIEKDSTVTTAAVSSKAKYSKKPDPNAPKITPPCTECGKRFWSDKALFGHMRCHPERQWRGINPPLNFRRSISVSPFSPNIATDLEDSSFTEEDQDIANCLLMLANSPNSISRVSDCRFECSSCKKVFGSHQALGGHRASHKNVRGCFAIAKSDEETEDEITLFGHDRSINLENRMSMMILGTAEHKCSGHKRFHWENNAAAEEGFVNLDLNMPAPLEDGSSSSYSSSLTLDLRLGL 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3370239 3371093 - CePI673135_02g003630.1 Cec02g0363 195416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0363 284 MobiDBLite consensus disorder prediction 34 74 - -
Cec02g0363 284 SUPERFAMILY beta-beta-alpha zinc fingers 80 188 IPR036236 -
Cec02g0363 284 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 33 282 - -
Cec02g0363 284 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Cec02g0363 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 193 IPR013087 -
Cec02g0363 284 ProSitePatterns Zinc finger C2H2 type domain signature. 168 188 IPR013087 -
Cec02g0363 284 Gene3D Classic Zinc Finger 39 193 - -
Cec02g0363 284 SMART c2h2final6 166 188 IPR013087 -
Cec02g0363 284 SMART c2h2final6 79 101 IPR013087 -
Cec02g0363 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Cec02g0363 284 Pfam C2H2-type zinc finger 165 189 IPR013087 -
Cec02g0363 284 Pfam C2H2-type zinc finger 81 103 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0363 Cec-Chr2:3370239 Cec05g0031 Cec-Chr5:394919 1.50E-13 dispersed
Cec02g1052 Cec-Chr2:18021465 Cec02g0363 Cec-Chr2:3370239 2.50E-24 transposed
Cec10g0386 Cec-Chr10:4643766 Cec02g0363 Cec-Chr2:3370239 9.60E-11 transposed
Cec02g0363 Cec-Chr2:3370239 Cec04g1798 Cec-Chr4:36785877 1.60E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28991 PF13912 zf-C2H2_6 6.90E-10 CL0361 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0363 - - - 0.0