Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0376 ATGCCTTTCTTCCTCCCTCTTCTCTTCCTCTCACTCTTCTCTTCTGCCTCTGCTTGTGATCGTTGTGTTCATCAAGCCAAAGCCGCCTTCTACCAAGACGAGTCCGCCGGTTTATATAGAGGCGCCTGTGGCTATGGCGACCTTACATTGCAGCTCTCAAATGGCTACTTCTCTGCCATTATGCCTCCTCTTTACAAGTACGGCGCTGGGTGTGGCTCTTGTTTTCAAGTAAGATGCAAGAATGAGAAAATTTGTAGTAAAGAAGGGACGAAAATTATTGTCACAGATCGAAATGATAATACATATACAGGATTGGTTCTTAGTCAGAAGGCTTTTGGTGAAATGGCTGTGAGTGGAAAAGATGGATTGCTATTGAGTTATGGAGTTGTGGATGTTGAATTCAAAAGGATTCCTTGTGAATACAATAACAAAAACTTGTTGGTTAGAGTGGAAGAATGGAGTCAATATCCTAATTACTTAGCCATTAAATTGCTTAACCAAGGTGGCCAAACGGAAATAGTAGCAATCGATATAGCTCAGGTTGGTTACTCGAATTGGGATTATATGGGTAGGAATTATGGAGCTGTATGGGAGACTAAAAAACCATTACCGAAAGGACCATTGCAGTTGCGGTTCGTGGTGACTTCTGGATATGATGGAAAGTGGATTTGGGCAAAGTACGTACTTCCTGCTGACTGGAGACCTGGATTGATTTACAATACCGGAGTTCAAATCTCCGACATTGCTAAAGAAGGTTGTCCAACAGAACAATGTGGCGATGGACAATGGAAACGATAG 798 42.48 MPFFLPLLFLSLFSSASACDRCVHQAKAAFYQDESAGLYRGACGYGDLTLQLSNGYFSAIMPPLYKYGAGCGSCFQVRCKNEKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAVSGKDGLLLSYGVVDVEFKRIPCEYNNKNLLVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGAVWETKKPLPKGPLQLRFVVTSGYDGKWIWAKYVLPADWRPGLIYNTGVQISDIAKEGCPTEQCGDGQWKR 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3554540 3555780 - CePI673135_02g003760.1 Cec02g0376 195429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0376 265 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 144 IPR007112 -
Cec02g0376 265 Pfam Lytic transglycolase 59 133 IPR009009 -
Cec02g0376 265 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 241 IPR007117 -
Cec02g0376 265 Pfam Expansin C-terminal domain 150 230 IPR007117 -
Cec02g0376 265 PANTHER EXPANSIN-B3 8 247 - GO:0009505(PANTHER)|GO:0009506(PANTHER)
Cec02g0376 265 SUPERFAMILY Barwin-like endoglucanases 8 143 IPR036908 -
Cec02g0376 265 SUPERFAMILY PHL pollen allergen 144 240 IPR036749 -
Cec02g0376 265 Gene3D - 11 140 IPR036908 -
Cec02g0376 265 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576(InterPro)
Cec02g0376 265 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576(InterPro)
Cec02g0376 265 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576(InterPro)
Cec02g0376 265 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576(InterPro)
Cec02g0376 265 PRINTS Expansin/Lol pI family signature 39 57 IPR007118 GO:0005576(InterPro)
Cec02g0376 265 Gene3D - 141 245 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0376 Cec-Chr2:3554540 Cec02g0380 Cec-Chr2:3592391 1.10E-98 dispersed
Cec02g0376 Cec-Chr2:3554540 Cec02g0377 Cec-Chr2:3564123 1.70E-96 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0376 - - - 0.0