Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec02g0383 | ATGGCTTTGTTTGTTTGCCTTCTCCTTTTCCTCCTCACCCCATTTGCTATTGCTTGTGATCGTTGTGTTCACCAATCCAAAGCTGCCTATTTCTCAAATGATTCACCACTTTCATCTGGTGCTTGTGGCTATGGCTCCTTAGCTCTTAGCTTGCTTGACGGACACCTCGCTGCGGGTGTTCCTTCCCTTTACAAAGAGGGTGTTCGTTGTGGTGCATGTTATCAGATAAGGTGCAGGGACAAGAAACTTTGCAGCAGAAGAGGGACCAAAGTAATTTTGACTGATCACAATATACACAACAATGGAACTGATTTTATTTTGAGTAAGAAAGCTTTCTCTGGCATGGCTCAGAAGGCCCATCAAAAGAATATTTTGAGACATGGGACTCTTGACATTGAGTACAAAAGGATGCCTTGTGAATACAAAAAACAAAATTTGTCAGTACGAATTGAAGAATCAAGCCAAAAGCCCCATCACATGGCTCTTAAGTTCTTATTCCAAGGTGGGCAAACAGATATAGTTTTGGTTCATCTTCATCCGGTGAATAGGGTTAGAACGGCGTTCATGAGCAGAAGACATGGGACCGCGGTGTGGGAAATCGACACGATGCCGGAAGCGGCGGTGATGTTTCAAATAAGGGTGATTTCGGGGTTCGACGGGATGTGGATTAGGGCGGAGCGGGCGGTTCCGGCGGACTGGAAGCCGGGGATGATCTACGACCTTGGAGTTCAGATAGACGCCATTGCCAAAGGACAAGAGAGCTGCAGAGAGTGCGATGAAGGGCATTGGAAAAAAAAGATGGCTTCTTCATTTCTTGCTTTTATTAGCTTCTTTGTTTTCATTATCTCTTTTGTTAATGCTTGCGATCGATGCATTCATCAATCCAAAGCGGCTTATTACTATAGTGATGCACTTATTACATATGGGGCATGTGGCTATGGTTCTTTGGCAAATGAATCTTTCCATGGATACATTGCTGGTGCGGTGCCTTTGCTATACAAACAAGGAGCTGGTTGTGGTGCTTGCTTTCAAGTGCGGTGCAAGAACAAGAAGCTGTGCAGCCCAATAGGAGCTAAAATAGTTTTGACAGATCAAAATTATGATAACCGAACTGATTTTGTTCTTAGTAGGAAAGCTTTCTCAGAAATGGCTCGATGGGGCAAGGCCCAAGATCTTTTGAAACTTGGAATGGTTGATATTGAATACAAGAGGGTACCATGCGGATACAAAAACAAAAATTTGTTGGTGAGAATAGAAGAATGGAGCAACAAGCCTTACTACTTGTCGATGAAATTCCTTTACCAAGGTGGCCAGACAGAAATAAAAGCAATTGACATTGCTCAAGTTGGTTCTTCAGATTGGGAAGCTTTGAAGAGAAACTATGGAGCTATTTGGGATACAAGTAAAGTACCTGAAGGAGCATTGCAACTAAGAATTGTGGTAGCTTCAGGGTATGATAATGAGAATTGGATTTGGACAAATTATGAAATTCCTGCTGATTGGAAAAATGGAGAAACTTATGATACAGGGATTCAAATTGAAGATATTGCCAAAGAATTTTGTTCCCCAAGAGAGTGTGGTGATAGAATATGGAAATGA | 1599 | 42.34 | MALFVCLLLFLLTPFAIACDRCVHQSKAAYFSNDSPLSSGACGYGSLALSLLDGHLAAGVPSLYKEGVRCGACYQIRCRDKKLCSRRGTKVILTDHNIHNNGTDFILSKKAFSGMAQKAHQKNILRHGTLDIEYKRMPCEYKKQNLSVRIEESSQKPHHMALKFLFQGGQTDIVLVHLHPVNRVRTAFMSRRHGTAVWEIDTMPEAAVMFQIRVISGFDGMWIRAERAVPADWKPGMIYDLGVQIDAIAKGQESCRECDEGHWKKKMASSFLAFISFFVFIISFVNACDRCIHQSKAAYYYSDALITYGACGYGSLANESFHGYIAGAVPLLYKQGAGCGACFQVRCKNKKLCSPIGAKIVLTDQNYDNRTDFVLSRKAFSEMARWGKAQDLLKLGMVDIEYKRVPCGYKNKNLLVRIEEWSNKPYYLSMKFLYQGGQTEIKAIDIAQVGSSDWEALKRNYGAIWDTSKVPEGALQLRIVVASGYDNENWIWTNYEIPADWKNGETYDTGIQIEDIAKEFCSPRECGDRIWK | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 3608344 | 3615688 | - | CePI673135_02g003830.1 | Cec02g0383 | 195436 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec02g0383 | 532 | Gene3D | - | 17 | 140 | IPR036908 | - | |
| Cec02g0383 | 532 | Gene3D | - | 283 | 407 | IPR036908 | - | |
| Cec02g0383 | 532 | SUPERFAMILY | Barwin-like endoglucanases | 7 | 142 | IPR036908 | - | |
| Cec02g0383 | 532 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 39 | 144 | IPR007112 | - | |
| Cec02g0383 | 532 | PANTHER | EXPANSIN-B3 | 275 | 515 | - | GO:0009505(PANTHER)|GO:0009506(PANTHER) | |
| Cec02g0383 | 532 | PRINTS | Expansin/Lol pI family signature | 454 | 468 | IPR007118 | GO:0005576(InterPro) | |
| Cec02g0383 | 532 | PRINTS | Expansin/Lol pI family signature | 329 | 347 | IPR007118 | GO:0005576(InterPro) | |
| Cec02g0383 | 532 | PRINTS | Expansin/Lol pI family signature | 395 | 411 | IPR007118 | GO:0005576(InterPro) | |
| Cec02g0383 | 532 | PRINTS | Expansin/Lol pI family signature | 307 | 325 | IPR007118 | GO:0005576(InterPro) | |
| Cec02g0383 | 532 | PRINTS | Expansin/Lol pI family signature | 495 | 509 | IPR007118 | GO:0005576(InterPro) | |
| Cec02g0383 | 532 | Pfam | Lytic transglycolase | 331 | 402 | IPR009009 | - | |
| Cec02g0383 | 532 | Pfam | Lytic transglycolase | 57 | 134 | IPR009009 | - | |
| Cec02g0383 | 532 | CDD | DPBB_EXLA_N | 14 | 141 | - | - | |
| Cec02g0383 | 532 | SUPERFAMILY | PHL pollen allergen | 412 | 508 | IPR036749 | - | |
| Cec02g0383 | 532 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 426 | 509 | IPR007117 | - | |
| Cec02g0383 | 532 | CDD | DPBB_EXLA_N | 283 | 409 | - | - | |
| Cec02g0383 | 532 | SUPERFAMILY | Barwin-like endoglucanases | 277 | 411 | IPR036908 | - | |
| Cec02g0383 | 532 | SMART | dpbb_1 | 325 | 402 | IPR007112 | - | |
| Cec02g0383 | 532 | SMART | dpbb_1 | 57 | 134 | IPR007112 | - | |
| Cec02g0383 | 532 | SUPERFAMILY | PHL pollen allergen | 145 | 240 | IPR036749 | - | |
| Cec02g0383 | 532 | Gene3D | - | 141 | 245 | IPR036749 | - | |
| Cec02g0383 | 532 | Gene3D | - | 409 | 513 | IPR036749 | - | |
| Cec02g0383 | 532 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 308 | 412 | IPR007112 | - | |
| Cec02g0383 | 532 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 158 | 241 | IPR007117 | - | |
| Cec02g0383 | 532 | Pfam | Expansin C-terminal domain | 418 | 484 | IPR007117 | - | |
| Cec02g0383 | 532 | Pfam | Expansin C-terminal domain | 148 | 230 | IPR007117 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g0378 | Cec-Chr2:3570387 | Cec02g0383 | Cec-Chr2:3608344 | 6.60E-166 | dispersed | |
| Cec02g0379 | Cec-Chr2:3587377 | Cec02g0383 | Cec-Chr2:3608344 | 6.70E-87 | dispersed | |
| Cec02g0380 | Cec-Chr2:3592391 | Cec02g0383 | Cec-Chr2:3608344 | 1.90E-100 | dispersed | |
| Cec02g0383 | Cec-Chr2:3608344 | Cec03g1283 | Cec-Chr3:28643291 | 3.50E-85 | dispersed | |
| Cec02g0382 | Cec-Chr2:3601231 | Cec02g0383 | Cec-Chr2:3608344 | 1.40E-98 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec02g0383 | - | - | - | 0.0 |