Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g0405 | ATGGTTATGGAGGATAACGAGAGCTGTGGGAGTAGAGCGTACGACTCGTTGTCGCCGGCGCAGAGTCGGCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTCTACGGCGTTTGAAGGATTCAAACAACGAAGAGGCTATGCAGCCTGGTTTCGATGACGAACTATGGGTTCACTTCAATCGTCTTCCCACTCGATATGCTCTAGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTTGCTCACGATCCGGCAAATCGACCTGCAATTGAAGTCCGCCTAGTGCAGGTCCAAGCCATTTCTGACGAGCATTCTGCTGAATTTGCTGATTCATGTTCTGTAAAAGACACTGATCATAGTTCTGCAAATTTTGTGGGCAGACAGAGCATACATCCACCACCTGCCTTCGGGTCATCTCCTAACCTTGAGGCCTTGGCCCTTGAAGCTAATAACTCTCAGGATCTGGAGGTTGATCAGTCTGTACATGCCAGAACACAGTTTTTCCGGCCTATGCATGAAATCACCTTCTCTACAGATGATAAGCCGAAACTTCTTAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACAGTTGACGGTTTCTCATTGGATGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCATTAGAGAAGGAAGTCTTACAGGTTGAGAATCGGGTTTGGCCAAATCGTAAATCCTCGTCTCCTGTGGGGGAACTCGATATAACAACTAAATGTGAGCTTGATCGGGTGGAAATACCCACAGATGGGACCGATGTATGGGAAATTAATCCTAGACATTTGAAGTTTGAGCATAAAGTTGCATCTGGTTCATATGGGGATCTGTATAAAGGTTCATACTGCAGTCAGGAAGTGGCTATTAAAGTTCTCAAAACTGAACGTGTAAATACAGATATGCAAAGTGAGTTTGCCCAGGAGGTATATATTATGAGAAAAGTAAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGCACGAAGCCCCCAAGCTTGTGCATTGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGAACTTTTAGGCTTCCATCTTTGCTCAAGGTGGCCATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGAGATCTAAAGGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCAGGGTAAAAGCTCAATCAGGAGTTATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTGTGGGAGCTGCTAACCGGAAAGCTACCTTATGAATTCCTAACACCATTACAAGCCGCAGTCGGAGTGGTACAAAAGGGTTTACGGCCTACTATTCCTAAGCACACTAATCCCAAGCTGGCTGAGTTGCTAGAAAAATGTTGGCAGCAAGATCCAACATGCAGGCCTGACTTCTGTGAAATTATCGATATATTGTTGCAGATAAGTAAGGAAGTAGCTGAAGACGGCGACGAACGACGAAAGGAGAAGAGTGGAGGATTATTTTCGGTGTTGAGACGAAACCATCACTAA | 1722 | 44.13 | MVMEDNESCGSRAYDSLSPAQSRQQRQKFEVYNEVLRRLKDSNNEEAMQPGFDDELWVHFNRLPTRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAISDEHSAEFADSCSVKDTDHSSANFVGRQSIHPPPAFGSSPNLEALALEANNSQDLEVDQSVHARTQFFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVDGWPYEETERLKTALEKEVLQVENRVWPNRKSSSPVGELDITTKCELDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGSYCSQEVAIKVLKTERVNTDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLEKCWQQDPTCRPDFCEIIDILLQISKEVAEDGDERRKEKSGGLFSVLRRNHH | 573 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3820343 | 3830221 | + | CePI673135_02g004050.1 | Cec02g0405 | 195458 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g0405 | 573 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 410 | 422 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | FunFam | serine/threonine-protein kinase HT1 | 372 | 562 | - | - | |
Cec02g0405 | 573 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Cec02g0405 | 573 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 45 | 544 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cec02g0405 | 573 | CDD | ACT_TyrKc | 179 | 246 | - | - | |
Cec02g0405 | 573 | ProSiteProfiles | Protein kinase domain profile. | 293 | 543 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cec02g0405 | 573 | FunFam | Serine/threonine-protein kinase isoform 1 | 283 | 371 | - | - | |
Cec02g0405 | 573 | Gene3D | Transferase(Phosphotransferase) domain 1 | 372 | 566 | - | - | |
Cec02g0405 | 573 | Pfam | Protein tyrosine and serine/threonine kinase | 293 | 541 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | SUPERFAMILY | ACT-like | 179 | 249 | IPR045865 | - | |
Cec02g0405 | 573 | CDD | STKc_MAP3K-like | 299 | 542 | - | - | |
Cec02g0405 | 573 | Coils | Coil | 231 | 251 | - | - | |
Cec02g0405 | 573 | PRINTS | Tyrosine kinase catalytic domain signature | 367 | 380 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | PRINTS | Tyrosine kinase catalytic domain signature | 404 | 422 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | PRINTS | Tyrosine kinase catalytic domain signature | 469 | 491 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | PRINTS | Tyrosine kinase catalytic domain signature | 450 | 460 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | PRINTS | Tyrosine kinase catalytic domain signature | 513 | 535 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | ProSiteProfiles | ACT domain profile. | 181 | 259 | IPR002912 | - | |
Cec02g0405 | 573 | SMART | serkin_6 | 293 | 543 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g0405 | 573 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 542 | IPR011009 | - | |
Cec02g0405 | 573 | Gene3D | Phosphorylase Kinase; domain 1 | 283 | 371 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0405 | Cec-Chr2:3820343 | Cec10g0042 | Cec-Chr10:495079 | 3.40E-227 | dispersed | |
Cec02g0405 | Cec-Chr2:3820343 | Cec01g1470 | Cec-Chr1:29367565 | 3.00E-66 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71727 | PF07714 | PK_Tyr_Ser-Thr | 7.00E-74 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g0405 | - | - | - | 0.0 |