Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0415 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGTTTCCAGCCGAGCTCCGATCTGTATGTGGCCGGGGAAATGAGGGGGCGGCAGGATGGGCTGTTATGGTACAAAGATAGTGGACAACACTTGAATGGAGAGTTTTCAATGTCTGTGATTCAGGCCAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCTGGCAGTTTGAGCTTACACGAGTCTGGCCCCAAAGGAACATTTGTTGGTGTGTATGATGGCCATGGAGGCCCTGAGACTTCTCGGTATATCTGTGATCATCTATTCCAGCATCTCAAGAGATTTACTTCTGAGCAAGATCTAATGTCTGCGGATGTAATACGCAAGGCGTTCCAAGCGACAGAAGAGGGGTTTTTTTCAATAGTTCGAAGTCAATGGTCAACAAATCCTCAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCACGTGCTGTTTTGGGTAGAGTAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTGTCAACAGAACACAATGTTTCTAACGAGTCGGTGAGGCAAGAGCTGCAGTCTTTGCACCCTGATGACTCACAAGTTGTGGTTTTAAGGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATTTCCAGATCCATAGGCGATGTGTACTTGAAAAAAGCTGAGTTCAATAAAGAACCGTTGTATGCAAAGTTTCGAGTTCAAAAACCCTTCAAAAAGCCATTTTTGAGCTCTGAACCAGCCATTTCTGAGATCCAGTTGAAGCCAGATGATCAATTTGTTATATTTGCATCAGATGGGTTGTGGGAGCACCTTAGCAATCAGGAAGCAGTCGATATAGTTCATAGCCACTCTCAAAATGGAAGTGCAAGAAGACTGGTCAGAGCTGCTCTTCAAGTGGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATTGGCCGTGGCGTTCGTCGCCATTTCCACGACGACATCACTGTGGTGGTTGTGTTTCTTGATACCAATATGCTCTTCAGAGCCAGCTCCACGAAGAGCTTGAGTGTCTCACTACGAGGCGGTGGAGTCAACCGGCTTCCTAACTCTTTATCCCCCGTCACTACGCCCGTGTAG 1173 45.69 MLSELMNFLRACFQPSSDLYVAGEMRGRQDGLLWYKDSGQHLNGEFSMSVIQANNLLEDQSQIESGSLSLHESGPKGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDLMSADVIRKAFQATEEGFFSIVRSQWSTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRVVKATGEVLAIQLSTEHNVSNESVRQELQSLHPDDSQVVVLRHNVWRVKGIIQISRSIGDVYLKKAEFNKEPLYAKFRVQKPFKKPFLSSEPAISEIQLKPDDQFVIFASDGLWEHLSNQEAVDIVHSHSQNGSARRLVRAALQVAAKKREMRYSDLKKIGRGVRRHFHDDITVVVVFLDTNMLFRASSTKSLSVSLRGGGVNRLPNSLSPVTTPV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3930559 3933845 - CePI673135_02g004150.1 Cec02g0415 195468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0415 390 FunFam Phosphatase 2C family protein 34 363 - -
Cec02g0415 390 ProSiteProfiles PPM-type phosphatase domain profile. 42 353 IPR001932 -
Cec02g0415 390 SMART PP2C_4 37 351 IPR001932 -
Cec02g0415 390 SUPERFAMILY PP2C-like 49 354 IPR036457 -
Cec02g0415 390 CDD PP2Cc 46 353 IPR001932 -
Cec02g0415 390 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169(InterPro)
Cec02g0415 390 Pfam Protein phosphatase 2C 70 321 IPR001932 -
Cec02g0415 390 Gene3D - 34 361 IPR036457 -
Cec02g0415 390 PANTHER PROTEIN PHOSPHATASE 37 352 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0415 Cec-Chr2:3930559 Cec10g0049 Cec-Chr10:548057 1.40E-160 dispersed
Cec05g1079 Cec-Chr5:9534241 Cec02g0415 Cec-Chr2:3930559 1.40E-14 transposed
Cec02g0415 Cec-Chr2:3930559 Cec02g1269 Cec-Chr2:29348677 8.70E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0415 - - - 0.0