Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0468 ATGTGGCTACAAAAAGGAAACAGTGTTAATAGCGTCAAAAAGGTAGCAGCAGCAGGCGGAGGGGGAAATGGGTTGGTTGCTATTGGTATAGACAGGGAAAAAGGAAGCCAAAATGCTCTCAGATGGGCCGCCGACCATTTGCTCGGAAAGGGTCAAACTGTGATTTTAATCCATGTTGTTCAGAGACCTTCCAGTGCGGCTGCTTCTTTGATTGGGGAAGCCATTGTTTGTAGTGGCGATGGTAATTTCACAGCTGATTCCCCTCGTAAGCAGCAGCTCGAGATGCAGACTAGAGACATTTTTCTCACCTTCCATTGCTATTGTACTCGCAAGGATATTCAATGTCTTGATGTTATATTGGAAGACACCGATATAGTTAAAGCATTAATCGAATACGTATCGTACGCTGCAATCGATAACTTGGTGCTCGGGGCTCCTTCGAAACATGGATTTATTAGGTTTAAGACGTCGAGCATGGGCAGTAGTGTGTCAAAAGGAGCACCGGATTTCTGCAATGTATATGTCATCTCGAAGGGGAAGGTGTCGTCAGTGAGAAATGCATCTCGCTCACCTCCCTTTACTTCCCCTCTACAAGACCATTTACGGAAGATTTCTAAGCCGATCGCAAAGGGAGCAATCACTCCTCGACATAAGTTTAATTTAAGAGACAGGACATCATTCAAGCCTCGCAGCATTCAAGATGAATCAATCAAGTCACCTTTCTCTCATGGAGGAGAGAGAACTTCTATCTCAAAATGTAGTGGAGGATTCTCTGAGTCAGAATCTGACATATCCTTTGTAAGCTCTGGCAGACCAAGCACGGATCGTACTTCTTCTGTTGCATTTGACTACTCGGATTCGGCTCCCCCACGATTTTCAACCAGCTCAGAGCATAGCTTTGCATCTCTACCATTTAAACCAAAATGGACAGACCTCAGTAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACATCATGTTCCTGGTCATCTCAGAACTTGGATGAAGCAGAACTTGAAATGAGGAGGCTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACAGCAAAGCAAAAGGCAACGGAACTAAATAATTGGAGACGTGAAGAAGAACAAAAACTAGAAGAGGCACGACTTGCACAAGAGGCAGCAATGGCTATTGCAGAGCAGGAGCGAGCGAGATGCAGAGCGGCAATGGAAGCAGCTGATGCAGCTAAGAGAATTGCAGAGTTCGAATCACATAAAAGAGAAAATCTAGAGATTAAAGCACTTAAAGAAGCAGAGGAAATGCAGAGAGCATTGAAAAATCTTGCACAGAGCGACATCAGATACAGGAGATATTCAATTGAGGAGGTTGAATCGGCGACGGAACATTTTGCACAATCTCGGAAGATTGGGGAAGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTTGATCACACATCAGTTGCAGTCAAGGTTTTGCGTCCTGATGCATCTCAAGGAAGGACACAGTTTCAGCAAGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCTGAATATGGCATTCTAGTGTATGAATACATGTCCAACGGAAGTTTGGAGGATCGACTCTTTCGAAAGGGGAACACTCCTGTTATTCCTTGGCAATTGAGGTTTCGAATTGCTGCCGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACAAAGCCAGAGCCATTGGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTGGACCACAACTATGTTTGCAAGATAAGTGATGTTGGTTTGGCTAGACTTGTACCTGCTGTGGCCGAAAATGTAACACAATGCTACATGACTTCGGCTGCTGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGTTGCTTCAACTAATTACAGCCAAGCCCCCCATGGGGTTGGCTCACCATGTTGCTCGCTCTATCGAGAAGGGGACTTTTTGGGAGCTTCTGGACCCAGCTGTGGTTGATTGGCCAGTGGAACAAGCACTTTGCTTTGCAAAATTAGCACTTCAATGTGCAGAACTTAGGCGAAAAGACAGACCAGATCTCGGCAAGGTTGTGTTGCCAGAACTTAACAAATTGAGAGAATTTGGTGAAGACAAAATGGAGTTCATGGTGTCAAGGGATAGTAGTGGATCTTTGAGCGGTTTTAGCCATGCCTCAATGGAGCAGGACGTAATGAGCGACCCACAACTAACGATGGCTTCAGAAAGTTCCAAGAGCCAATCTAGTGAATCATCACAGAAAGCCTTATCCAAAGGCTTCTATCATCAGTTTCTCAGAAGGTTGGATTTCCCACAACTCCATTCATCATCTATAAATACATATTTGATTGAGTTCAGAAACAACACAAGTCTTCATTCTTCTCAAGAGAAGTTGTCTTCTCATCTCAAGATTGTTCATGCTAAGCCAAGTCTTCGACGATCCACATCGTCGGGAAGTAGAGCCTCTCCAAAGTCTCTTGATGTTCCAAAAGGATACTTTACGGTCTATGTCGGAGGACAGAAGAAGCATTTTGTCATCCCGCTATCTTACTTGAACCAACCTTTGTTTCAAGATTTGTTGAGTCAAGCCGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATACCCTGCAATGAAGATACTTTTGTTAATCTTATTCATAGTTTAAATGACTCATGA 2799 43.91 MWLQKGNSVNSVKKVAAAGGGGNGLVAIGIDREKGSQNALRWAADHLLGKGQTVILIHVVQRPSSAAASLIGEAIVCSGDGNFTADSPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDIVKALIEYVSYAAIDNLVLGAPSKHGFIRFKTSSMGSSVSKGAPDFCNVYVISKGKVSSVRNASRSPPFTSPLQDHLRKISKPIAKGAITPRHKFNLRDRTSFKPRSIQDESIKSPFSHGGERTSISKCSGGFSESESDISFVSSGRPSTDRTSSVAFDYSDSAPPRFSTSSEHSFASLPFKPKWTDLSNLNDFSSVSDESCRTSCSWSSQNLDEAELEMRRLKLELKQTMEMYSTACKEALTAKQKATELNNWRREEEQKLEEARLAQEAAMAIAEQERARCRAAMEAADAAKRIAEFESHKRENLEIKALKEAEEMQRALKNLAQSDIRYRRYSIEEVESATEHFAQSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDASQGRTQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVCKISDVGLARLVPAVAENVTQCYMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPPMGLAHHVARSIEKGTFWELLDPAVVDWPVEQALCFAKLALQCAELRRKDRPDLGKVVLPELNKLREFGEDKMEFMVSRDSSGSLSGFSHASMEQDVMSDPQLTMASESSKSQSSESSQKALSKGFYHQFLRRLDFPQLHSSSINTYLIEFRNNTSLHSSQEKLSSHLKIVHAKPSLRRSTSSGSRASPKSLDVPKGYFTVYVGGQKKHFVIPLSYLNQPLFQDLLSQAEEEFGYDHPMGGITIPCNEDTFVNLIHSLNDS 932
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4360495 4369997 + CePI673135_02g004680.1 Cec02g0468 195521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0468 932 Coils Coil 428 448 - -
Cec02g0468 932 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 543 - -
Cec02g0468 932 PANTHER OS02G0152300 PROTEIN 26 788 IPR051348 -
Cec02g0468 932 MobiDBLite consensus disorder prediction 234 258 - -
Cec02g0468 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0468 932 Gene3D HUPs 25 176 IPR014729 -
Cec02g0468 932 ProSiteProfiles Protein kinase domain profile. 471 747 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0468 932 Coils Coil 368 403 - -
Cec02g0468 932 Gene3D Phosphorylase Kinase; domain 1 438 543 - -
Cec02g0468 932 Pfam Auxin responsive protein 850 928 IPR003676 GO:0009733(InterPro)
Cec02g0468 932 FunFam U-box domain-containing protein 51 544 743 - -
Cec02g0468 932 CDD STK_N 25 179 - -
Cec02g0468 932 Pfam Protein kinase domain 472 685 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0468 932 SUPERFAMILY Protein kinase-like (PK-like) 453 729 IPR011009 -
Cec02g0468 932 MobiDBLite consensus disorder prediction 770 789 - -
Cec02g0468 932 Coils Coil 337 357 - -
Cec02g0468 932 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 176 - -
Cec02g0468 932 Gene3D Transferase(Phosphotransferase) domain 1 544 753 - -
Cec02g0468 932 SMART serkin_6 471 733 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0468 932 Pfam Universal stress protein family 27 168 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0468 Cec-Chr2:4360495 Cec05g2872 Cec-Chr5:38896352 2.10E-242 dispersed
Cec02g0476 Cec-Chr2:4397957 Cec02g0468 Cec-Chr2:4360495 1.10E-34 dispersed
Cec11g0394 Cec-Chr11:4079272 Cec02g0468 Cec-Chr2:4360495 4.50E-23 dispersed
Cec11g0395 Cec-Chr11:4084747 Cec02g0468 Cec-Chr2:4360495 2.70E-23 dispersed
Cec11g0400 Cec-Chr11:4132690 Cec02g0468 Cec-Chr2:4360495 1.30E-10 dispersed
Cec02g0467 Cec-Chr2:4354371 Cec02g0468 Cec-Chr2:4360495 4.50E-19 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71728 PF00069 Pkinase 5.50E-41 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0468 - - - 0.0