Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0482 ATGGGTGATACTGAAGATGCTAACACTGAGAACATGCGAAATCTTCAATGTTCGTATGGAGTATCTTCTTCTTCAGCTGGAAATCTTCCTTTCTCGATGGATCAACTTAAAATTTCCCAAATGAACTGCTCACAAATCCGTCCACCGCACTTTCAGTCAAATTTTCTTGCGGATAATAGTAGAAGAATTGGGATACCTCCTAGCCCCAACTCACCGCAGATCCCACCAATTTCACCGTATTCTCAGATCCCGATCTCGCGTCCGATGAATCAGCAAAATTATAACCCGGTGCCTACTCATTCCCGATCGTTGTCTCAGCCTTCTTTTTTCTCTCTCGATTCTTTGCCCCCTTTAAGCCCATCTCCATTTCGTGAATCCCCAACTACATCGAATTCAGATCAGGTTTCTGCAGATACATCAATGGAGGATAGGGATAACAGTTCACATTCTTTGTTGCCTCCCTCACCTTATATGAGGGCCAATTCTTCTAAGATGGGAGATTCTTTACCTCCTCGTAAAGCACATAGGCGGTCTAGTAGTGATATTCCATTTGGATTATCTTCAATGATTCAGCCATCTCCTCTTCTCCCATTCAATAGCTCTGGTGGATTGGAACGATCAACTAGTAGTAAAGAGAATGCTGGCTTATTAAAACCCGCCAGCCAGTTTGTTAAAAGAGAACCTAGTTTGGAGAAAAGCGTTGACAACAATTTAGAAGGAACGGGTGAGAGGAAATCTGATGGGGACAGCGTGGACGACTTGTTTTCTGCTTATATGAATTTGGATAATATCGATTTGTTCAACTCTTCTGGGACTAACGACAAGAATGGTCTAGAGAATCGAGAGGATTTGGATAGTAGGGGTAGTGGAACAAAGACAAATGGGGGTGAGAGCAGTGATAATGAAGCAGAAAGCAGTGTAAATGAAAGCGGGGATAGCGCTCAAATGCCTGGATTGAATTCATCTGCTGAGAAGAGGGAAGGGATCAAACGGACCGCAGGGGGAGAGATTGCTCCAACTACCAGACATTACCGAAGTGTCTCCATGGATAGTTTCATGGGCAAGTTGCAGTTTGGTGATGAGTCTCCCAAAATGCCTCCCACACCACCTGGCGTTCGCCCGGGGCAACTTTCTTCAAACAACTTAGTTGATGGTAATTCTGCTCCATTCAGTTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCCGAGATTGCTTTGACTGATCCCAAGCGTGCAAAGAGGATCTTGGCAAACCGTCAGTCTGCTGCTCGATCGAAAGAGCGAAAGATGCGGTATATATCTGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACACTGTCCGCTCAACTCACACTTCTACAGAGAGATTCCTTGGGCCTTACAAACCAGAATAATGAACTGAAGTTTCGTCTACAAGCCATGGAACAACAAGCACAACTACGGGATGCTCTTAACGAAGCCTTAACCGCGGAGGTTCAGAGATTGAAACTCGCTACAACAGAGCTAAATGCGCAGTCTCATCCCTCCAACGGAGTAATGCCCCAATCTTCCATCAATCACCATGGCCTACAGCTTCAGCTTCAGCACCAGCAACAACAACAACAGATCCAGCAGAATGGGAATGCAACCACAAAACCAGAATCCAACCAATAA 1701 44.97 MGDTEDANTENMRNLQCSYGVSSSSAGNLPFSMDQLKISQMNCSQIRPPHFQSNFLADNSRRIGIPPSPNSPQIPPISPYSQIPISRPMNQQNYNPVPTHSRSLSQPSFFSLDSLPPLSPSPFRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRANSSKMGDSLPPRKAHRRSSSDIPFGLSSMIQPSPLLPFNSSGGLERSTSSKENAGLLKPASQFVKREPSLEKSVDNNLEGTGERKSDGDSVDDLFSAYMNLDNIDLFNSSGTNDKNGLENREDLDSRGSGTKTNGGESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGEIAPTTRHYRSVSMDSFMGKLQFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSLGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTELNAQSHPSNGVMPQSSINHHGLQLQLQHQQQQQQIQQNGNATTKPESNQ 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4492028 4494411 - CePI673135_02g004820.1 Cec02g0482 195535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0482 566 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 420 483 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0482 566 MobiDBLite consensus disorder prediction 59 250 - -
Cec02g0482 566 MobiDBLite consensus disorder prediction 289 320 - -
Cec02g0482 566 Coils Coil 438 472 - -
Cec02g0482 566 Coils Coil 501 521 - -
Cec02g0482 566 MobiDBLite consensus disorder prediction 538 566 - -
Cec02g0482 566 Gene3D - 421 473 - -
Cec02g0482 566 FunFam probable transcription factor PosF21 421 474 - -
Cec02g0482 566 SUPERFAMILY Leucine zipper domain 422 473 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0482 566 MobiDBLite consensus disorder prediction 83 115 - -
Cec02g0482 566 Pfam bZIP transcription factor 422 473 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0482 566 MobiDBLite consensus disorder prediction 267 384 - -
Cec02g0482 566 CDD bZIP_plant_RF2 423 472 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0482 566 MobiDBLite consensus disorder prediction 181 216 - -
Cec02g0482 566 MobiDBLite consensus disorder prediction 228 250 - -
Cec02g0482 566 MobiDBLite consensus disorder prediction 1 25 - -
Cec02g0482 566 SMART brlzneu 418 482 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g0482 566 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 156 555 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec02g0482 566 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0482 Cec-Chr2:4492028 Cec08g0722 Cec-Chr8:18933957 3.30E-41 dispersed
Cec02g0482 Cec-Chr2:4492028 Cec02g0484 Cec-Chr2:4505122 6.70E-268 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28999 PF00170 bZIP_1 1.30E-08 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0482 - - - 0.0