Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g0502 | ATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGTTATGCTGATGAAGCTGCTCTTTGCCATGGTTGCGACCTCCATGTTCATCGCGCTAATAAGCTCGCTGGAAAACACTCTCGATTCTCTTTACTTCACCCGATCAAAAAGGATTCTCCTCGTTGCGATATCTGTCAGGAACGGCGCGCGCTTGTATTCTGTCAACAAGATAGGGCAATTCTTTGCAGAGAATGCGACATTTCGATTCACGAAGCGAACGAACATACACAGAAGCACAATCGATTTCTTCTTACCGGTGTGAAGCTTTCTTCGACTTGTTATTCGTATCAAACATCTTCGTCCTCCAATGGCTGTGATGCCGCCATGGATGTTAAAACTGGAAGCTCCAACGCTTGCAGCAAAAGACCTAAAATGGCCGCGAACGAAATCTCCAGCTCTCATTCCGCTGAAAAAGCTACTCCGTCGACAAGTAATTACAAGGTTGAAGACGGCCAAGCATTAAGCGACGGCGGTTCGTTCTCGACAAGCAGCATATCGGAATATTTAGAGACATTGCCGGGATGGTGCGTGGAGGAGTTTCTTGATCCTTCCGCCGCTGCCAATCGTTTCTGTAAGTTTAATGGCGAAATTCTTGGATTTGGGAATCAAAATCTGGAAAGGCAACAAGAATCACTAAGCACTCTCAAGAACACCTTGGAAATTTTAGGTAAAAATTCTCAAATTATTACTACTAGGTGTTGGAATGGAATACTTGGGATCTCCATGAAAACTTGTAAAGATGAAAAAATGCAACAGTGGGTGATCTGA | 816 | 44.24 | MKIRCDVCDQAEASVFCYADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKKDSPRCDICQERRALVFCQQDRAILCRECDISIHEANEHTQKHNRFLLTGVKLSSTCYSYQTSSSSNGCDAAMDVKTGSSNACSKRPKMAANEISSSHSAEKATPSTSNYKVEDGQALSDGGSFSTSSISEYLETLPGWCVEEFLDPSAAANRFCKFNGEILGFGNQNLERQQESLSTLKNTLEILGKNSQIITTRCWNGILGISMKTCKDEKMQQWVI | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4689833 | 4690929 | - | CePI673135_02g005020.1 | Cec02g0502 | 195555 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g0502 | 271 | CDD | Bbox1_BBX-like | 58 | 100 | IPR049808 | - | |
Cec02g0502 | 271 | Pfam | B-box zinc finger | 3 | 46 | IPR000315 | GO:0008270(InterPro) | |
Cec02g0502 | 271 | Pfam | B-box zinc finger | 54 | 92 | IPR000315 | GO:0008270(InterPro) | |
Cec02g0502 | 271 | Coils | Coil | 218 | 241 | - | - | |
Cec02g0502 | 271 | CDD | Bbox1_BBX-like | 5 | 47 | IPR049808 | - | |
Cec02g0502 | 271 | ProSiteProfiles | Zinc finger B-box type profile. | 53 | 100 | IPR000315 | GO:0008270(InterPro) | |
Cec02g0502 | 271 | MobiDBLite | consensus disorder prediction | 145 | 164 | - | - | |
Cec02g0502 | 271 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 218 | IPR051979 | GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER) | |
Cec02g0502 | 271 | FunFam | B-box zinc finger protein 21 | 1 | 98 | - | - | |
Cec02g0502 | 271 | Gene3D | Classic Zinc Finger | 1 | 99 | - | - | |
Cec02g0502 | 271 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270(InterPro) | |
Cec02g0502 | 271 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270(InterPro) | |
Cec02g0502 | 271 | SMART | bboxneu5 | 53 | 100 | IPR000315 | GO:0008270(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0502 | Cec-Chr2:4689833 | Cec09g1443 | Cec-Chr9:21344998 | 1.40E-34 | dispersed | |
Cec11g0420 | Cec-Chr11:4393937 | Cec02g0502 | Cec-Chr2:4689833 | 5.30E-44 | wgd | |
Cec02g0502 | Cec-Chr2:4689833 | Cec08g1502 | Cec-Chr8:26751415 | 4.80E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29003 | PF00643 | zf-B_box | 3.30E-07 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g0502 | - | - | - | 0.0 |