Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g0524 | ATGAACAGAACATTACCGGAGATGTTGCATTGTTTGAACACTACTGGGAACTGTCCTGATACTCTCAGTGTTCTTGAGAGGCAGAGAGCTCGTTTGAAATGGCAGCAAGATCAGCTTTTGCAGCAGCAACAGCAGCCATTGAATCAGAGCTGTTTCAATAAGGTTGACTACGGCGGTGGATTTCCGCCGCCGGTGGCTGTTCCAGCGGATCACTTCAAGGGGTTTCCTGGGTACATGAGTGGCGGCAGCGGTGGTGGAGGTGGTGGGTTGTCACTTGTTGAGATGGTAATGGGGGCAGTGAAGCCTGACCCTGGGTTGAATGATGGGTGGTCTGAAATGGGAAAGTTTGATCCTTCTTTGTTGTTGAATGCCACTGCTTATGAGCTCAATTCTTCTCTCTCTAGAACCTCCAGCTGCCCGCCGGCGGTGGCTCCGACGGTGGCGGAGAAGATGGGGTCGGCGGCTGGAAGTGATAGCTTCAAGAAAAGGAAAGCTGAGAAAGTTCACAACACTACTACTACCACCACCACCACCACCACCAACAACAACAACAACAACAACAACAACAATAACAAGGTGACTGTGGAAGAAGATAACAACAGCAGCAGCAAGGAGAAGAGGATCAAAGCAAGTTCAGAAGAAGGAGAATTATCCAAAACCACAGATCAAAACAGTACCAAAAACAACTCAACCACCACAACCACAACAAACAATAACAGAGAAACTTCAGCTGATACCTCAAAAGAAAACTCCAAAGCTTCAGAGGTTCAAAAGCCTGATTACATTCATGTCAGAGCTCGCCGTGGCCAAGCTACTGATAGCCATAGCTTAGCTGAAAGAGCTAGAAGGGAAAAAATCAGTGAGAGAATGAAGTACTTGCAAGATTTAGTACCAGGATGCAACAAAATCACTGGAAAAGCTGGAATGCTCGACGAGATCATAAACTATGTCCAATCTCTTCAGAGACAAGTTGAGTTCTTGTCCATGAAGTTAGCTGCTGTTAATCCAAGGTTGGACTTCAATGTCGATGATCTCTTCAACAAAGAGGTTTTCCCCCAATCTTGCACCACCGCGAACTTCCCGACGATCGGCGGAATGTCATCGGAGATGACAAATCCTTCTTCCTACTTACAATTCAATCCAAATAATCAACAAATGGTCTCGTGTTGTGGATTAGAAATGGGAATCAATACCTCCGATGCCGCGGCTCTTCGAAGAACAATCAGCGCCCCTGTTTCTTTCCCGGAAACTTTCCTCGATTCATCTTGCCTCACCCAATTTCAACCCTCTTCAGGGTGGGATGTGGATTTGCAGAATCTGTACAATGTGGGTTTCGATCAAGGAAGATCATCAAACGCCTTTTCATCTCAACCATATACAGGTTCAATTGAAGGAGGCATTATAAAGATGGAAATGTGA | 1419 | 46.02 | MNRTLPEMLHCLNTTGNCPDTLSVLERQRARLKWQQDQLLQQQQQPLNQSCFNKVDYGGGFPPPVAVPADHFKGFPGYMSGGSGGGGGGLSLVEMVMGAVKPDPGLNDGWSEMGKFDPSLLLNATAYELNSSLSRTSSCPPAVAPTVAEKMGSAAGSDSFKKRKAEKVHNTTTTTTTTTTNNNNNNNNNNNKVTVEEDNNSSSKEKRIKASSEEGELSKTTDQNSTKNNSTTTTTTNNNRETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPQSCTTANFPTIGGMSSEMTNPSSYLQFNPNNQQMVSCCGLEMGINTSDAAALRRTISAPVSFPETFLDSSCLTQFQPSSGWDVDLQNLYNVGFDQGRSSNAFSSQPYTGSIEGGIIKMEM | 472 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4933702 | 4936534 | - | CePI673135_02g005240.1 | Cec02g0524 | 195577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g0524 | 472 | SMART | finulus | 276 | 326 | IPR011598 | GO:0046983(InterPro) | |
Cec02g0524 | 472 | MobiDBLite | consensus disorder prediction | 217 | 244 | - | - | |
Cec02g0524 | 472 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 270 | 320 | IPR011598 | GO:0046983(InterPro) | |
Cec02g0524 | 472 | Gene3D | - | 267 | 341 | IPR036638 | GO:0046983(InterPro) | |
Cec02g0524 | 472 | MobiDBLite | consensus disorder prediction | 170 | 197 | - | - | |
Cec02g0524 | 472 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 153 | 387 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Cec02g0524 | 472 | MobiDBLite | consensus disorder prediction | 245 | 259 | - | - | |
Cec02g0524 | 472 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 268 | 339 | IPR036638 | GO:0046983(InterPro) | |
Cec02g0524 | 472 | FunFam | Basic helix-loop-helix transcription factor | 267 | 339 | - | - | |
Cec02g0524 | 472 | MobiDBLite | consensus disorder prediction | 198 | 216 | - | - | |
Cec02g0524 | 472 | Coils | Coil | 22 | 45 | - | - | |
Cec02g0524 | 472 | MobiDBLite | consensus disorder prediction | 150 | 259 | - | - | |
Cec02g0524 | 472 | CDD | bHLH_AtBPE_like | 260 | 345 | - | - | |
Cec02g0524 | 472 | Pfam | Helix-loop-helix DNA-binding domain | 274 | 321 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0524 | Cec-Chr2:4933702 | Cec06g2019 | Cec-Chr6:33329021 | 9.00E-32 | dispersed | |
Cec01g0741 | Cec-Chr1:8134303 | Cec02g0524 | Cec-Chr2:4933702 | 7.50E-43 | transposed | |
Cec05g0849 | Cec-Chr5:7179996 | Cec02g0524 | Cec-Chr2:4933702 | 3.90E-39 | transposed | |
Cec05g2567 | Cec-Chr5:36652382 | Cec02g0524 | Cec-Chr2:4933702 | 1.30E-37 | transposed | |
Cec05g2888 | Cec-Chr5:39026225 | Cec02g0524 | Cec-Chr2:4933702 | 8.50E-36 | transposed | |
Cec06g1853 | Cec-Chr6:31891516 | Cec02g0524 | Cec-Chr2:4933702 | 9.50E-34 | transposed | |
Cec08g0939 | Cec-Chr8:21204990 | Cec02g0524 | Cec-Chr2:4933702 | 8.00E-34 | transposed | |
Cec08g1734 | Cec-Chr8:28459138 | Cec02g0524 | Cec-Chr2:4933702 | 3.10E-29 | transposed | |
Cec09g0837 | Cec-Chr9:7777346 | Cec02g0524 | Cec-Chr2:4933702 | 3.00E-38 | transposed | |
Cec10g1745 | Cec-Chr10:32130978 | Cec02g0524 | Cec-Chr2:4933702 | 3.90E-35 | transposed | |
Cec11g0454 | Cec-Chr11:4814712 | Cec02g0524 | Cec-Chr2:4933702 | 2.30E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29004 | PF00010 | HLH | 1.30E-06 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g0524 | - | - | - | 0.0 |