Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0544 ATGCGGGTGAAACATAGTTCTGGATTGATTCCATTGGTTTCCAAGGAGATCGCTGAGATTAAAGAGCCCGATCGGACTGCAGATTGCGAGAAAGGGGAAGTCGTTAGGGTTGAGAATAAGAAGGAGATTGAGTTCGAGAATGGAGTAGGTAAGAAGAGTCAAGAGAGCGACGTGTCCGGCGGTGGTCGAAGCGACGTGTCGGTGGAGGATCCGAACTTAGGGTGGGGACGGTGGTACAGCTTGAAGGAACTGGAAATAGCGACTGATGGGTTTCTTGAAGAGAATGTGATCGGAGAAGGAGGCTACGGCATCGTGTACAGAGGAGTTTCACCGGACGGCTCCGTCGTCGCTGTGAAGAATCTTCTTAACAATAAGGGTCAAGCAGAGAAAGAGTTCAAGGTTGAAGTAGAGGCTATTGGAAAAGTAAGGCACAAGAACTTGGTGGGTCTGATAGGCTATTGTGCAGATGGAGCACAGAGGATGCTTGTGTATGAATTTATTGATAATGGCAACTTGGAGCAATGGTTACATGGTGATGTAGGGCCTGTTAGTCCTCTAACATGGGATATTAGGATGAAGATTGCTCTTGGAACGGCAAAGGGTTTGGCCTATTTGCATGAGGGTTTAGAGCCTAAAGTTGTTCACCGTGATATAAAGTCCAGCAACATTCTCTTAGATAGAAAATGGAATGCAAAAGTGTCAGATTTTGGACTTGCAAAGCTCTTACAACCTGAAGCCAGCTATGTAACTACTCGTGTAATGGGTACCTTTGGATACGTCTCCCCGGAGTATGCAAGCACAGGCATGCTTAATGAGGGGAGTGATGTATACAGTTTCGGTGTTCTACTTATGGAGATCATTACTGGCAGAAGCCCGATTGACTATTCCAGGCCCCCAGGAGAGATGAACTTGGTGGACTGGTTTAAAGGAATGGTGGCAAATCGACGGGGGGAAGAGGTCATAGATCCGTTGATTGAGATTCCACCCTCTCCAAGAACTCTAAAGAGAGTGTTGCTTGTTTGTCTACGCTGCATTGATTTGGATGCCAATAAAAGGCCAAAGATGGGGCAAATCGTTCATATGCTAGAGGCAGATGATTTTCCTTATCGTTCGGAGCTTCGATCTGTTCGAGAGAAAGATAACCAGCCTGCTCGTTTAGACGTGCCAAGTAAACTCCATTGA 1182 46.45 MRVKHSSGLIPLVSKEIAEIKEPDRTADCEKGEVVRVENKKEIEFENGVGKKSQESDVSGGGRSDVSVEDPNLGWGRWYSLKELEIATDGFLEENVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCADGAQRMLVYEFIDNGNLEQWLHGDVGPVSPLTWDIRMKIALGTAKGLAYLHEGLEPKVVHRDIKSSNILLDRKWNAKVSDFGLAKLLQPEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVIDPLIEIPPSPRTLKRVLLVCLRCIDLDANKRPKMGQIVHMLEADDFPYRSELRSVREKDNQPARLDVPSKLH 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5220020 5223432 + CePI673135_02g005440.1 Cec02g0544 195597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0544 393 SUPERFAMILY Protein kinase-like (PK-like) 67 363 IPR011009 -
Cec02g0544 393 ProSiteProfiles Protein kinase domain profile. 91 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0544 393 PANTHER OS01G0323000 PROTEIN 40 380 IPR052232 -
Cec02g0544 393 Gene3D Transferase(Phosphotransferase) domain 1 167 380 - -
Cec02g0544 393 SMART serkin_6 91 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0544 393 FunFam Probable serine/threonine-protein kinase At1g01540 71 166 - -
Cec02g0544 393 CDD STKc_IRAK 97 363 - -
Cec02g0544 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0544 393 FunFam Putative receptor-like serine/threonine-protein kinase 167 377 - -
Cec02g0544 393 Pfam Protein tyrosine and serine/threonine kinase 95 362 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0544 393 Gene3D Phosphorylase Kinase; domain 1 66 166 - -
Cec02g0544 393 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0544 Cec-Chr2:5220020 Cec05g0161 Cec-Chr5:1373772 2.30E-137 dispersed
Cec02g0544 Cec-Chr2:5220020 Cec08g1662 Cec-Chr8:27947811 1.30E-140 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71730 PF00069 Pkinase 2.10E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0544 - - - 0.0