Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0622 ATGGCCCCGTTTGAATTCAAATCAAACTACGGAGCTCTCTTTATTGGCGCTCGAAATTCTCTCTCAAGAGCCCATCACTGGAAAATCGAAGGGAACGAGCTTCAGTTCAACGACGGAATCCTACAACAGAAAATGGTGGAATCGAACCTGACTTACGAGGAATGCCGACGCCAGAGGTTGGAGGAGAATAAGAAGAGGATGGAAGAGCTTAATCTGAACAAACTTGCCGATGCTCTGAAATTTTCCAGCCCTAAATCCTCTCCGACCAAACAGCTAAAGCGTCCTCGTCAGCCACTCGATAAGTCGTCTTTCAGTGTGAGAAGGTCTAGCCGGTTTGCCGATAAGCCCCCTCCGAACTATAAGGAGGTGCCCATTGAACCACTTCCAGGTATAAGAAGGACTTATCAAAGGAGAGATTTGCTGAATCGGATTTATGCGTCACATGAAGAAAGGCAATATGCTATTGACAGAGCAAGAGACCTTCAATCTAGCCTGGAATCTAGGCACCCCAGTTTTGTGAAGCCCATGCTTCAATCACATGTCACAGGGGGATTTTGGCTGGGTCTACCAGTTCAATTTTGCAAGACACACCTTCCCCTTGAGGATGAAATGCTAACTCTGGTTGACGAGGATGATAATGAGTTCCAAACGAAATACCTTGCCGATAAAACAGGTCTCAGTGGTGGTTGGAGAGGGTTTTCCATTGATCATCAGTTAGTAGATGGGGATGCTTTGGTGTTTCAGTTAACTAAGCCAACTGAATTCAAGGTATATATCATCAGAGCATACAATTTAGAAGACAGAGAAGATACCAATGAGGATTCTGATGTCACCCAATTGGAAAAAAGTGGCAAAAGAAATACCAAATCATCAGGGCATAAATCCAGGGCAAATAATTCTGAGGATAAAGGAGATAACGGTGAGGATTCAGCAGATGTCTCTCAGTTGGAAAAAAGTGGCAAAAAAACTACTAAATCATCAGGGCGTAAAAGCAGGGCAACTAAATCCAAAGATAAAGCAGATAACGGCGCGGATTTGGATGTCCCCGAGCTGGAAAAAAGTGGCAAAAGAATTACTAGATCATCAAGTAAAGGGAAAAAGTAA 1104 43.75 MAPFEFKSNYGALFIGARNSLSRAHHWKIEGNELQFNDGILQQKMVESNLTYEECRRQRLEENKKRMEELNLNKLADALKFSSPKSSPTKQLKRPRQPLDKSSFSVRRSSRFADKPPPNYKEVPIEPLPGIRRTYQRRDLLNRIYASHEERQYAIDRARDLQSSLESRHPSFVKPMLQSHVTGGFWLGLPVQFCKTHLPLEDEMLTLVDEDDNEFQTKYLADKTGLSGGWRGFSIDHQLVDGDALVFQLTKPTEFKVYIIRAYNLEDREDTNEDSDVTQLEKSGKRNTKSSGHKSRANNSEDKGDNGEDSADVSQLEKSGKKTTKSSGRKSRATKSKDKADNGADLDVPELEKSGKRITRSSSKGKK 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6231105 6233565 + CePI673135_02g006220.1 Cec02g0622 195675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0622 367 SMART B3_2 172 263 IPR003340 GO:0003677(InterPro)
Cec02g0622 367 MobiDBLite consensus disorder prediction 269 367 - -
Cec02g0622 367 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 52 266 IPR044837 -
Cec02g0622 367 CDD B3_DNA 170 261 IPR003340 GO:0003677(InterPro)
Cec02g0622 367 ProSiteProfiles B3 DNA-binding domain profile. 172 263 IPR003340 GO:0003677(InterPro)
Cec02g0622 367 Gene3D - 147 264 IPR015300 -
Cec02g0622 367 MobiDBLite consensus disorder prediction 78 126 - -
Cec02g0622 367 Pfam B3 DNA binding domain 172 261 IPR003340 GO:0003677(InterPro)
Cec02g0622 367 MobiDBLite consensus disorder prediction 331 359 - -
Cec02g0622 367 SUPERFAMILY DNA-binding pseudobarrel domain 165 262 IPR015300 -
Cec02g0622 367 Coils Coil 50 77 - -
Cec02g0622 367 MobiDBLite consensus disorder prediction 295 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0622 Cec-Chr2:6231105 Cec08g1626 Cec-Chr8:27647340 7.90E-60 dispersed
Cec02g0622 Cec-Chr2:6231105 Cec05g1172 Cec-Chr5:10656705 4.10E-32 wgd
Cec02g0622 Cec-Chr2:6231105 Cec08g1625 Cec-Chr8:27641935 1.10E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29013 PF02362 B3 3.20E-15 CL0405 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0622 - - - 0.0