Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g0664 | ATGGCTTTGCACTCAAATAAACTCAGGACCCAACGCCTCCATAACTCTCTCTTCTTCTTCGACTTCTTCCACTGCCCTGAACAACAACACCTTCAAACAGAGTATCCCATTTTCCTCAACAATGGCGGCACCAACGACTTCCCCTTTTTCCAAGAAACAACCCATTTCCATATTTACGAAGACGAGGAGCTCAATCATTTGTTGTCCAAAGAAAAAGACCAGAATCTCCAAGCCGGCGCCGTTTTGAAAACCTTGGTTCAAACAGATAATGCTTTGTCTCTCGCTAGAACAGAGGCCATCGACTGGTTGCTTAAAGTTAATGCCTTTTATGGCTTCTCCTCTCTCACAGCTCTCTTAGCAATTAATTACCTCGATAGAATCCTCTCTGGCCCCCATTTTCAAAGAGATAAGCCATGGATGCTTCAGCTTCTTGCTGTAACTTGCATCTCTTTAGCTGCTAAAGTCGAAGAAATTCGTGTCCCTCTTCTTCTAGATCTCCAGGTGGAAGATTCAAAGTACATTTTTGAAGCGAAAACGATACAGAGAATGGAGCTTTTGGTGCTTACTGCTCTGCAATGGAAGATGCATCCGGTGACCCCTGTTTCGTTTCTTGGCATTATCACAAAAGGGCTTGGAATGAAGAATCAGTACATTCAAAGAGAGTTTCTTAGACGTTGTGAGCGTCTTCTCCTCTCTCTCGTCTCTGATTCGAGATCGGTGGGGATTCTTCCTTCTGTAATGGCGGTATCAGCAATGGTGATCGTTGTTGAAGAGATGGGAAGCTGTAACCCATTGGAGGAGTTTCAGGATCAGCTTCTTAATGCCCTCAAAATAAATAAGGGGAGAGTGAAGGAGTGTTGTAAAGTGATAATGGAGGCAAAAGCCAAAGGATCAGGGAAAAGGAAGCATGTGGAGGAGGAAGCAGAATCAGAAGCAGAAGCAGAATCATCAGAAGCAGAAACAGAGGAAGAAGCAGAAGCAGGGAGTCCAAATGGAGTAATGGAGGCTAATTTCAGCTGTGAAAGCTCCAATGATTCGTGGGAAATGGGGTCGATTGTGTCAGAGTGCACACATTTTTCTTATTCTTCTTCTTCTTCTTCCAAAAGAATCAGACCCACTCGATGA | 1125 | 44.09 | MALHSNKLRTQRLHNSLFFFDFFHCPEQQHLQTEYPIFLNNGGTNDFPFFQETTHFHIYEDEELNHLLSKEKDQNLQAGAVLKTLVQTDNALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVTPVSFLGIITKGLGMKNQYIQREFLRRCERLLLSLVSDSRSVGILPSVMAVSAMVIVVEEMGSCNPLEEFQDQLLNALKINKGRVKECCKVIMEAKAKGSGKRKHVEEEAESEAEAESSEAETEEEAEAGSPNGVMEANFSCESSNDSWEMGSIVSECTHFSYSSSSSSKRIRPTR | 374 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6803829 | 6806231 | + | CePI673135_02g006640.1 | Cec02g0664 | 195717 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g0664 | 374 | CDD | CYCLIN_AtCycD-like_rpt2 | 198 | 290 | - | - | |
Cec02g0664 | 374 | PANTHER | CYCLINS | 59 | 261 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cec02g0664 | 374 | Pfam | Cyclin, C-terminal domain | 198 | 314 | IPR004367 | - | |
Cec02g0664 | 374 | Coils | Coil | 300 | 325 | - | - | |
Cec02g0664 | 374 | CDD | CYCLIN_AtCycD-like_rpt1 | 95 | 193 | - | - | |
Cec02g0664 | 374 | Gene3D | - | 77 | 196 | - | - | |
Cec02g0664 | 374 | Gene3D | - | 65 | 288 | - | - | |
Cec02g0664 | 374 | SMART | cyclin_7 | 101 | 189 | IPR013763 | - | |
Cec02g0664 | 374 | MobiDBLite | consensus disorder prediction | 310 | 325 | - | - | |
Cec02g0664 | 374 | ProSitePatterns | Cyclins signature. | 96 | 127 | IPR048258 | - | |
Cec02g0664 | 374 | Pfam | Cyclin, N-terminal domain | 67 | 195 | IPR006671 | - | |
Cec02g0664 | 374 | SMART | Cyclin_C_2 | 198 | 318 | IPR004367 | - | |
Cec02g0664 | 374 | FunFam | D6-type cyclin | 79 | 196 | - | - | |
Cec02g0664 | 374 | SUPERFAMILY | Cyclin-like | 53 | 196 | IPR036915 | - | |
Cec02g0664 | 374 | MobiDBLite | consensus disorder prediction | 298 | 346 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0664 | Cec-Chr2:6803829 | Cec05g2245 | Cec-Chr5:33906360 | 9.90E-58 | dispersed | |
Cec02g0664 | Cec-Chr2:6803829 | Cec04g1399 | Cec-Chr4:33623813 | 6.40E-57 | wgd | |
Cec02g0664 | Cec-Chr2:6803829 | Cec05g1197 | Cec-Chr5:10987306 | 5.20E-67 | wgd | |
Cec02g0664 | Cec-Chr2:6803829 | Cec08g1670 | Cec-Chr8:28028145 | 2.80E-68 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g0664 | K14505 | - | csv:101222066 | 548.895 |