Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0664 ATGGCTTTGCACTCAAATAAACTCAGGACCCAACGCCTCCATAACTCTCTCTTCTTCTTCGACTTCTTCCACTGCCCTGAACAACAACACCTTCAAACAGAGTATCCCATTTTCCTCAACAATGGCGGCACCAACGACTTCCCCTTTTTCCAAGAAACAACCCATTTCCATATTTACGAAGACGAGGAGCTCAATCATTTGTTGTCCAAAGAAAAAGACCAGAATCTCCAAGCCGGCGCCGTTTTGAAAACCTTGGTTCAAACAGATAATGCTTTGTCTCTCGCTAGAACAGAGGCCATCGACTGGTTGCTTAAAGTTAATGCCTTTTATGGCTTCTCCTCTCTCACAGCTCTCTTAGCAATTAATTACCTCGATAGAATCCTCTCTGGCCCCCATTTTCAAAGAGATAAGCCATGGATGCTTCAGCTTCTTGCTGTAACTTGCATCTCTTTAGCTGCTAAAGTCGAAGAAATTCGTGTCCCTCTTCTTCTAGATCTCCAGGTGGAAGATTCAAAGTACATTTTTGAAGCGAAAACGATACAGAGAATGGAGCTTTTGGTGCTTACTGCTCTGCAATGGAAGATGCATCCGGTGACCCCTGTTTCGTTTCTTGGCATTATCACAAAAGGGCTTGGAATGAAGAATCAGTACATTCAAAGAGAGTTTCTTAGACGTTGTGAGCGTCTTCTCCTCTCTCTCGTCTCTGATTCGAGATCGGTGGGGATTCTTCCTTCTGTAATGGCGGTATCAGCAATGGTGATCGTTGTTGAAGAGATGGGAAGCTGTAACCCATTGGAGGAGTTTCAGGATCAGCTTCTTAATGCCCTCAAAATAAATAAGGGGAGAGTGAAGGAGTGTTGTAAAGTGATAATGGAGGCAAAAGCCAAAGGATCAGGGAAAAGGAAGCATGTGGAGGAGGAAGCAGAATCAGAAGCAGAAGCAGAATCATCAGAAGCAGAAACAGAGGAAGAAGCAGAAGCAGGGAGTCCAAATGGAGTAATGGAGGCTAATTTCAGCTGTGAAAGCTCCAATGATTCGTGGGAAATGGGGTCGATTGTGTCAGAGTGCACACATTTTTCTTATTCTTCTTCTTCTTCTTCCAAAAGAATCAGACCCACTCGATGA 1125 44.09 MALHSNKLRTQRLHNSLFFFDFFHCPEQQHLQTEYPIFLNNGGTNDFPFFQETTHFHIYEDEELNHLLSKEKDQNLQAGAVLKTLVQTDNALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVTPVSFLGIITKGLGMKNQYIQREFLRRCERLLLSLVSDSRSVGILPSVMAVSAMVIVVEEMGSCNPLEEFQDQLLNALKINKGRVKECCKVIMEAKAKGSGKRKHVEEEAESEAEAESSEAETEEEAEAGSPNGVMEANFSCESSNDSWEMGSIVSECTHFSYSSSSSSKRIRPTR 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6803829 6806231 + CePI673135_02g006640.1 Cec02g0664 195717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0664 374 CDD CYCLIN_AtCycD-like_rpt2 198 290 - -
Cec02g0664 374 PANTHER CYCLINS 59 261 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cec02g0664 374 Pfam Cyclin, C-terminal domain 198 314 IPR004367 -
Cec02g0664 374 Coils Coil 300 325 - -
Cec02g0664 374 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Cec02g0664 374 Gene3D - 77 196 - -
Cec02g0664 374 Gene3D - 65 288 - -
Cec02g0664 374 SMART cyclin_7 101 189 IPR013763 -
Cec02g0664 374 MobiDBLite consensus disorder prediction 310 325 - -
Cec02g0664 374 ProSitePatterns Cyclins signature. 96 127 IPR048258 -
Cec02g0664 374 Pfam Cyclin, N-terminal domain 67 195 IPR006671 -
Cec02g0664 374 SMART Cyclin_C_2 198 318 IPR004367 -
Cec02g0664 374 FunFam D6-type cyclin 79 196 - -
Cec02g0664 374 SUPERFAMILY Cyclin-like 53 196 IPR036915 -
Cec02g0664 374 MobiDBLite consensus disorder prediction 298 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0664 Cec-Chr2:6803829 Cec05g2245 Cec-Chr5:33906360 9.90E-58 dispersed
Cec02g0664 Cec-Chr2:6803829 Cec04g1399 Cec-Chr4:33623813 6.40E-57 wgd
Cec02g0664 Cec-Chr2:6803829 Cec05g1197 Cec-Chr5:10987306 5.20E-67 wgd
Cec02g0664 Cec-Chr2:6803829 Cec08g1670 Cec-Chr8:28028145 2.80E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0664 K14505 - csv:101222066 548.895