Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0675 ATGGGAAGCGTTGAAGGACAAAGAACAACAACAGGATTTGCAGCAAGAGATCCATCTGGGTTTCTCTCTCCTTACACTTACGAACTCAGAGAAACAGGGGCAGAGGATGTTTACATAAGAGTTATATGTTGTGGGCTTTGTCATACTGATATTCATCAGATCAAAAACGAGCTTGGAATGTCCAATTATCCCATGGTTCCAGGGCATGAAGTTGTTGGTGAAGTGGTGGAAATTGGGAAGAATGTGAAGAGATTTAAAGTGAAGGATATTGTGGGAGTTGGATGCATAGTTGGATCTTGCAAAATTTGCGAGCGATGTGGAACTGACAGAGAACAATATTGCAATAACAAAATTTGGACTAATAACGATGTCTATACCGACGGTAGGCCCACTCAGGGCGGCTTCGCCGCCGCCATGGTCGTCGATCAAAAGTTTGTGGTGAAGGTACCAGATGGAATGGCACCGGAGCAGGCAGCGGCGCTACTATGCGCGGGCGTGACAGTGTACAGTCCATTGAACCATTTTGGGATGAAGAAAAGTGGGCTAAGAGGAGGGATCTTAGGGCTTGGTGGTGTTGGGCACATGGGGGTGAAACTAGCAAAGGCATTGGGCCATCATGTCACAGTTATAAGCTCCTCCAACAAGAAGAGGGAAGAAGCTCTGGACCATCTAGGGGCCGACGACTACCTTGTTAGCTCCGACGAGGATCGGATGCAACAGGCCGTCGACTCCCTCGACTACATCATCGACACCGTGCCGGTCTTTCACCCTCTCGAGCCTTATCTTTCGCTGCTCAAGCTCGATGGCAAGTTAATCATGTTGGGTGTTATTAATAATCCTCTCCAATTCGTCTCTCCCATGGTTATTCTTGGGAGGAAGACAATCACAGGGAGTTTCATAGGGAGCATGAAGGAGACACAGGAGATTCTGGATTTTTTCAAAGAGAAGGAATTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTTAGATACAGGTTTGTTGTGGATGTTGAAGGAAGCAAATTTTAA 1068 46.25 MGSVEGQRTTTGFAARDPSGFLSPYTYELRETGAEDVYIRVICCGLCHTDIHQIKNELGMSNYPMVPGHEVVGEVVEIGKNVKRFKVKDIVGVGCIVGSCKICERCGTDREQYCNNKIWTNNDVYTDGRPTQGGFAAAMVVDQKFVVKVPDGMAPEQAAALLCAGVTVYSPLNHFGMKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKREEALDHLGADDYLVSSDEDRMQQAVDSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILDFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6962907 6965556 - CePI673135_02g006750.1 Cec02g0675 195728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0675 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cec02g0675 355 Gene3D - 164 320 - -
Cec02g0675 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Cec02g0675 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
Cec02g0675 355 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cec02g0675 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cec02g0675 355 Pfam Alcohol dehydrogenase GroES-like domain 34 151 IPR013154 -
Cec02g0675 355 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Cec02g0675 355 Gene3D - 13 350 - -
Cec02g0675 355 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Cec02g0675 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Cec02g0675 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0675 Cec-Chr2:6962907 Cec04g1521 Cec-Chr4:34726967 1.10E-103 dispersed
Cec08g0996 Cec-Chr8:21780994 Cec02g0675 Cec-Chr2:6962907 2.10E-12 transposed
Cec02g0675 Cec-Chr2:6962907 Cec05g1205 Cec-Chr5:11082250 2.30E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0675 K00083 - csv:101214622 637.106