Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0707 ATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGAGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGTACTTGGCGAGATCACTAACTCATTGATCTTCAGTTCGAGCCAGTGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACAAAGAGGAACTACCTGAAGGAAGGTCTGCTGACCGTTCGGAGAAATCTGGCTCTGCATTTAGCATTTATAACCATCTTCGATCTCTGGAGATGGAATTACACGTGAAGTTACTGTCCAACAACATTGAAAAGGCTTACAATAGTGATTCCAGTTTAACTTTCACTCGTATGCGAGAAATTCTAGTGGATTGGTTAGTTGAGGTTGCTGAGGAATACAAGCTTGTGTCGGACACCCTATATCTCACCATATCACATATTGACAGATACCTATCCTGGCATGCTGTTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGACGCATGAAGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGACAATACTTATACCAAAGAACAGGTACTGAATACGGAGAGAGAAGTACGCAAATTCTTGACCTGTGAAGGCGCCCCCACGATAAAAGTTTTCCTCAGAATATATACAAAAGTTGCTTTAGAAAATTGGAAGGCTCAAGATTTGCAATTTGAGTTATTGAGTTGTTATCTCGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTATATATCTTACCTTCAAAAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCGGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTGGCAATCAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCCGAGTTATCTTCACCCTCAGAAATTCCTGCATATTATTTTGAGGACATTGATCAGCAATCATTCAACGGGTTTCCATCCAAGAATTGTGTAAATTATTCATTTGTGAATGCTCAAGGTGGGGTGGGGAAATCTCTACTATTGCATTGTTATGGAAACTCTTTTATCCAATGCTTGCCACCATATTGA 1191 42.4 MDPPEYHKPSVRTSKKRDSEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKDLDKEELPEGRSADRSEKSGSAFSIYNHLRSLEMELHVKLLSNNIEKAYNSDSSLTFTRMREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAVDRSKLQLLGVCCMLIASTHEEISPPHVEDFCYITDNTYTKEQVLNTEREVRKFLTCEGAPTIKVFLRIYTKVALENWKAQDLQFELLSCYLAELSLLDHRCVYILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQSFNGFPSKNCVNYSFVNAQGGVGKSLLLHCYGNSFIQCLPPY 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7403638 7407131 - CePI673135_02g007070.1 Cec02g0707 195760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0707 396 Pfam Cyclin, C-terminal domain 217 339 IPR004367 -
Cec02g0707 396 MobiDBLite consensus disorder prediction 1 31 - -
Cec02g0707 396 MobiDBLite consensus disorder prediction 48 77 - -
Cec02g0707 396 PANTHER CYCLINS 59 328 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cec02g0707 396 FunFam Cyclin A1 203 336 - -
Cec02g0707 396 PIRSF Cyclin_A_B_D_E 2 347 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cec02g0707 396 SUPERFAMILY Cyclin-like 84 212 IPR036915 -
Cec02g0707 396 Pfam Cyclin, N-terminal domain 107 211 IPR006671 -
Cec02g0707 396 SMART Cyclin_C_2 217 340 IPR004367 -
Cec02g0707 396 Gene3D - 97 215 - -
Cec02g0707 396 SMART cyclin_7 125 209 IPR013763 -
Cec02g0707 396 SMART cyclin_7 221 309 IPR013763 -
Cec02g0707 396 Gene3D - 84 336 - -
Cec02g0707 396 MobiDBLite consensus disorder prediction 55 75 - -
Cec02g0707 396 SUPERFAMILY Cyclin-like 217 341 IPR036915 -
Cec02g0707 396 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0707 Cec-Chr2:7403638 Cec05g2257 Cec-Chr5:33994556 1.70E-84 dispersed
Cec02g0707 Cec-Chr2:7403638 Cec08g1681 Cec-Chr8:28093077 2.80E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0707 K06627 - csv:101213896 617.846