Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0761 ATGGGACTAGCTCTAATTCTAGCTTCAATATCTCCCACGGTTGCGGAAAGCAGCCCCCAGGACTTCGTCGATGCCCACAATGCCATCCGTGCCGAGTACGGGGTTGGACCGGTCACTTGGAACAAAACCTTGGCTGAGTATGCTAAAAATTACGCCGAAACTAAGATCACTACCTGCGAGATGGAGCATTCTATGGGACCTTATGGGGAAAACTTGGCCGAAGCATTTGAAACGACAACAGCAGAATTGACAGTGAAGTATTGGGCTAGTGAGAAGAAATTTTACGATCACGAATCAAACAAGTGCGTCAAGGAAGAGTGCGGCCATTTCCTTCAAGTCGTGTGGAAGGACACGAAAATGATTGGTTGCGCTGAAGCTAAGTGCAACAACAACTATATTTTCACCATTTGTAACTATTATCCTCCAGGAGGCTACCCTGACCAATTTCCTTATTAA 456 46.05 MGLALILASISPTVAESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKITTCEMEHSMGPYGENLAEAFETTTAELTVKYWASEKKFYDHESNKCVKEECGHFLQVVWKDTKMIGCAEAKCNNNYIFTICNYYPPGGYPDQFPY 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8419992 8420447 + CePI673135_02g007610.1 Cec02g0761 195814

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0761 151 SUPERFAMILY PR-1-like 17 151 IPR035940 -
Cec02g0761 151 Pfam Cysteine-rich secretory protein family 23 139 IPR014044 -
Cec02g0761 151 PRINTS Allergen V5/Tpx-1 family signature 107 123 IPR001283 -
Cec02g0761 151 PRINTS Allergen V5/Tpx-1 family signature 134 147 IPR001283 -
Cec02g0761 151 PRINTS Allergen V5/Tpx-1 family signature 84 97 IPR001283 -
Cec02g0761 151 PRINTS Allergen V5/Tpx-1 family signature 38 56 IPR001283 -
Cec02g0761 151 Gene3D CAP 13 151 IPR035940 -
Cec02g0761 151 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 20 145 IPR001283 GO:0005615(PANTHER)
Cec02g0761 151 FunFam CAP, cysteine-rich secretory protein, antigen 5 16 151 - -
Cec02g0761 151 SMART SCP_3 17 147 IPR014044 -
Cec02g0761 151 CDD CAP_PR-1 19 151 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0761 K13449 - - csv:101210746 272.322
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0758 Cec-Chr2:8372545 Cec02g0761 Cec-Chr2:8419992 1.50E-89 dispersed
Cec02g0761 Cec-Chr2:8419992 Cec10g1005 Cec-Chr10:22688575 8.60E-37 dispersed
Cec02g0760 Cec-Chr2:8399046 Cec02g0761 Cec-Chr2:8419992 6.50E-54 tandem
Cec02g0761 Cec-Chr2:8419992 Cec02g0762 Cec-Chr2:8460816 7.30E-52 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g802 . . Bda06g01145 . . . . . Cmo19g00540 . . . . . . Cpe04g00339 Cpe15g00419 . . . . . . . Cla02g00713 Cam02g0763 Cec02g0761 Cco02g0787 Clacu02g0754 Cmu02g0748 Cre02g1065 . . . . Lsi03g00627 Csa07g00657 . Cme01g00145 . . . . . . . . Sed07g1155 . . Cma11g01688 . . . . . Bhi11g01091 Tan01g0594 Cmetu07g1308 . . . . . . . . . . . Lsi03g00997 . Chy01g00154 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004442 0 2 0 0 0 2 0 2 2 1 1 2 4 1 2 3 2 0 2 2 1 0 0 1 1 1 8 1 2 0 43