Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0773 ATGGACAAATCATCTATGGTGGTTTTTTCTGAGATGGGAATGGAGGATAATGGGTTTTTCAATCAGTGGCACAAGAGCTCAATGGATGAGCTTGGTATGCTCCCATTAGCAGCTACTTTTGGGGAGAATTTGCAGCATTCTTATGCTCAAACAAACATCGACCAGAAGGTTTCTTTAAACCATTCTCACAATGCCATACTTGGGTATGTGAAACAGCTCAAAAGTGATGGGTGGAGTTCATACCAGACAACTAATCATTTGCCAAACTCACAAGTTATTGCGTATCCGACCGCATCTGTTTCAGCTTCCAACTACACGAACCAAATGGACTTCACGAGGCCAAAAGAGGAGGTTGTGTGTCCCCAGAGTATTAGCAACCTCCCTTCTGATATGTTGGTTTCTCAGGGCTCATTAGCCTACCAAAGCCATGTAACCAAGTCGAATCGTGGAACAAGAAGTCCGTCTACAAACAGTAGAATCCCCCAGGCTCAAGATCACATTCTTGCAGAGCGGAGAAGGCGAGAGAAGCTCAGTCAGCGGTTTATCGCTTTATCTGCTATAGTTCCTGGCCTAAAGAAGATGGACAAGGCTTCGGTTCTTGGAGATGCCATTAAGTACCTGAAACAACTCCAAGAGAAAGTGAAGATACTTGAGGAACAAACCCGGAGGAAAGACATCGAATCTGTTGTATTCGTCAAGAAATCCCAAGTTTTTGCTGATGGAAACAACACATCAAAAGAGGAGGACGAGCCCCTTCCCGAGATTGAAGCAAGATTTTGTGACAAAAATGTCCTTATAAGAATACACTGTGAGAAAAAGAAAGATGTCTTAGAGAAAACAATTGCTGAAATTGAAAAGTTGCACCTTACAATAGTCAACAGCAGTGTTATGTCATTTGGGAGTCTTGCTCTCGACATAACTATTATTGCGCAGATGGATAATGAATTCTGTCTGACGTTAAAGGACCTCGTGAAGAAGTTACAGTCGACTTTGCGCTCGTTTTAA 1005 42.69 MDKSSMVVFSEMGMEDNGFFNQWHKSSMDELGMLPLAATFGENLQHSYAQTNIDQKVSLNHSHNAILGYVKQLKSDGWSSYQTTNHLPNSQVIAYPTASVSASNYTNQMDFTRPKEEVVCPQSISNLPSDMLVSQGSLAYQSHVTKSNRGTRSPSTNSRIPQAQDHILAERRRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQTRRKDIESVVFVKKSQVFADGNNTSKEEDEPLPEIEARFCDKNVLIRIHCEKKKDVLEKTIAEIEKLHLTIVNSSVMSFGSLALDITIIAQMDNEFCLTLKDLVKKLQSTLRSF 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8743432 8745066 - CePI673135_02g007730.1 Cec02g0773 195826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0773 334 Coils Coil 200 227 - -
Cec02g0773 334 Gene3D - 160 233 IPR036638 GO:0046983(InterPro)
Cec02g0773 334 MobiDBLite consensus disorder prediction 144 163 - -
Cec02g0773 334 SMART finulus 167 216 IPR011598 GO:0046983(InterPro)
Cec02g0773 334 PANTHER BHLH TRANSCRIPTION FACTOR 11 332 IPR052610 -
Cec02g0773 334 MobiDBLite consensus disorder prediction 144 165 - -
Cec02g0773 334 CDD bHLH_AtNAI1_like 163 235 - -
Cec02g0773 334 Pfam Helix-loop-helix DNA-binding domain 165 211 IPR011598 GO:0046983(InterPro)
Cec02g0773 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 210 IPR011598 GO:0046983(InterPro)
Cec02g0773 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 223 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0773 Cec-Chr2:8743432 Cec04g1499 Cec-Chr4:34509591 4.00E-42 dispersed
Cec02g0773 Cec-Chr2:8743432 Cec10g0170 Cec-Chr10:1673160 1.90E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29020 PF00010 HLH 2.40E-10 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0773 - - - 0.0