Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0781 ATGATTTCCATAGCCCAAAATCCCAATGTCTCCTCCGAACTCTCCTCCTCTCCCCCGCCTTCCACCGCCGCAACCCATACTTTCCGATCCAAATTACCCGATATTACAATCCCCGACCACCTCCCTCTTCACAGTTACTGCTTTCAGAAGCTCTCTGAAGTTTCCCACCGCCCCTGTTTGATCGTCGGCTCCACTGGCAAATCCTATTCCTACTCCGACACCCACCTCTTCTCCCTCAAAGCCGCCGCCACTTTCTCTAAACTTGGAGTTAAGAAAGGCGATGTCATTATGATTCTTCTCCAGAACTCTCCCGAATTTGTTTTCTCTTTTATGGCTTCCTCCATGCTCGGCGCCGTCGCCACCACCGCAAATCCGTACTACACGGCGGCGGAGATTTCCAAGCAGTTGAAGGCCTCCGGTGCCAAATTCGTGGTTACTTACTCCCAATGCGTCGACAAGCTCAAAGAATCCGGCGAACATCTCACCATTGTCACCGTCGATGACCCGCCAGAGAATTGTCTGAGCTTCTCGATGGTGTACGACGCCGATGTGAATGACGTCCCCTCCGTGGAGATTGACACAAACGACGCCGTTTCGCTACCGTTCTCCTCTGGCACGACCGGGCTCCCGAAGGGTGTGATTTTGACTCATAAGAACATGGTGTCGAGTGTGGCTCAACAGGTGGATGGAGAGAATCCAAACTTGTATTTAAGAAGAAACGACGTAGTGTTATGCGTGTTACCAATGTTCCACATATTCTCGTTGAGCAGCATAGTTTTGATATCAATTAGGTCAGGGGCAGCTCTGCTTTTGATGGAGAAGTTCGAGATAGAGTCATTGCTAAGACTAATAGAGAGGCACGAGGTGACAGTGGCCGCGGTGGTGCCGCCGCTTGTGGTAGCGCTAGTGAAGAACCCGAGGGTGGCGGATTTTGACCTGAGCTCGATTAGATTGGTCCTTTCCGGAGCGGCGCCGCTGCGGAAGGAGCTGGAGGAGGCTCTCATGGACAGGCTTCCTCAAGCCATTTTTGGTCAGGGTTATGGGATGACGGAAGCGGGTCCCGTGCTGAGCATGTGCTCGGCTTTTGCAAAGGAGCCTCTGATGCCGACAAAATCAGGTTCCTGTGGCAGAGTAGTGAGAAACTCGGAGCTCAAAGTCATTGACCCACAAACCGGCGACTCCCTCACTTATAATCAACCTGGAGAGATTTGTGTTCGAGGTCCTCAAGTAATGAAAGGATATTTGAACGACCCGGTGTCCACGTCCTTGACTGTCGACGTGGAGGGTTGGCTTCATACGGGTGACATTGGTTACATTGACGATGAAGATGAAATTTTTATTGTTGACAGAGTCAAAGAGATCATTAAATTTAAAGGTTTTCAGGTGGCACCAGCAGAGTTAGAGGCCCTTCTTGTAACCCATCCATCTATTGTGGATGCCGCTGTTGTCCCGCAAAATGATGATGTTGCTGGTGAAGTTCCAGTGGCTTTCGTAGTTCCATCAACTCATGATGAACTTACTGAGGACGCAGTAAAAGAATTCATAGCAAAGCAGGTTGTGTTCTACAAGAGATTGCAGAAAGTGTATTTTGTGCAAACAATTCCAAAGTCACCCTCTGGAAAGATTTTGAGAAAGGAACTCAAAGCCAAGCTCTCAGTGTCACCTGGATTTTAG 1674 49.64 MISIAQNPNVSSELSSSPPPSTAATHTFRSKLPDITIPDHLPLHSYCFQKLSEVSHRPCLIVGSTGKSYSYSDTHLFSLKAAATFSKLGVKKGDVIMILLQNSPEFVFSFMASSMLGAVATTANPYYTAAEISKQLKASGAKFVVTYSQCVDKLKESGEHLTIVTVDDPPENCLSFSMVYDADVNDVPSVEIDTNDAVSLPFSSGTTGLPKGVILTHKNMVSSVAQQVDGENPNLYLRRNDVVLCVLPMFHIFSLSSIVLISIRSGAALLLMEKFEIESLLRLIERHEVTVAAVVPPLVVALVKNPRVADFDLSSIRLVLSGAAPLRKELEEALMDRLPQAIFGQGYGMTEAGPVLSMCSAFAKEPLMPTKSGSCGRVVRNSELKVIDPQTGDSLTYNQPGEICVRGPQVMKGYLNDPVSTSLTVDVEGWLHTGDIGYIDDEDEIFIVDRVKEIIKFKGFQVAPAELEALLVTHPSIVDAAVVPQNDDVAGEVPVAFVVPSTHDELTEDAVKEFIAKQVVFYKRLQKVYFVQTIPKSPSGKILRKELKAKLSVSPGF 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8944051 8950865 + CePI673135_02g007810.1 Cec02g0781 195834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0781 557 Gene3D - 452 553 IPR045851 -
Cec02g0781 557 Pfam AMP-binding enzyme 56 415 IPR000873 -
Cec02g0781 557 SUPERFAMILY Acetyl-CoA synthetase-like 24 550 - -
Cec02g0781 557 Gene3D - 21 451 IPR042099 -
Cec02g0781 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 22 548 - GO:0016207(PANTHER)|GO:0016405(PANTHER)
Cec02g0781 557 FunFam Long-chain-fatty-acid--CoA ligase FadD 29 452 - -
Cec02g0781 557 CDD 4CL 37 547 - -
Cec02g0781 557 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Cec02g0781 557 MobiDBLite consensus disorder prediction 1 25 - -
Cec02g0781 557 FunFam 4-coumarate--CoA ligase 2 453 554 - -
Cec02g0781 557 Pfam AMP-binding enzyme C-terminal domain 466 541 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0781 Cec-Chr2:8944051 Cec10g1289 Cec-Chr10:27002219 1.40E-188 dispersed
Cec02g0781 Cec-Chr2:8944051 Cec11g1308 Cec-Chr11:27128232 3.60E-181 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0781 K01904 - csv:101221344 931.013