Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0841 ATGACCTTCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCTTCTTGCAATGGACTCAATTTCGATGGGATTCTCTTGCTTTCCTTTAAGTATGCCGTTCTGGATGATCCTCTCTTTGTTCTTCAGAATTGGAATTACTCCGACGACACCCCCTGTTCATGGCGAGGAGTCGTATGTTCCGCCGATGGTTCCGGTGGCTCTAGAGTTACAGGTTTGTCTCTTCCGAGTTCTCAGCTTATGGGCTCTGTTTCTTCTGATTTGGGTCTGATTCAAAATCTTCAATCGGTTGATCTTTCTAACAATTCCTTTAATGGGTCTCTTCCCCGGTCTCTGTTCAACGCCACCATGCTCCGGTTTCTTGATTTGTCCGATAATTTGATTTCCGGCGAGGTTCCTGGGCCAGAGGGTGACCTTAGGAATTTGCAAGTTCTTAACCTTTCCGGTAATGCTCTGTTCGGGAAGTTTCCGAGTGATCTCGTGAATTTGAGTAATCTCACGGTTGTGTCTCTGAAGAACAATTACATTTCCGGTGCAATTCCCGGTGGGTTTAAAACGGTGGAGGTTTTGGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCCGTCTGATTTTGGTGGCGACAGTTTACATTACTTTAACATCTCATACAACAGACTTTCCGGGGAAATTCCGCCGGATTTCGCCCACAAAATTCCGGCTAATGCCATAATTGATCTCTCCTTCAACAACCTCACCGGAGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAACTCCTTCACCGGAAACCGCCAACTCTGCGGTGAGTTAACGAAAACCCCATGCCCAATTACGTCATCGCCATCCTCTCTCCCACCGGCCATCGCCGCCATTCCGCTAGACCCAAGTACTCCGGAAACGACCTCGCCGGAAAAGCAGAGCGAAACAGGGTTTAAACCGTCCACAATCGTGGCCATTGTACTGGGAGACGTCGTCGGATTGGCAATTCTGTGCCTCCTCTTCTTCTACGTCTTCCATTTGAAGAAAAAAAACAAAGCCGTCGAAACCCATTTGAAAAACGAACCCAATTTAGCCAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCACGATGGTCCTGCCTCAGAAAAACAGGGGATCCAGAAGAGGCAAATTCCGATCAAGCGAGTGTGTTATCCTTCTCCGGCCATCGCGAGACGGCGGAGGAGGGTGCAGAAGAGAACAAGAGAGGAATATTGGTGACAGTAGACGGCGGAGAGAAGGAGCTGGAACTCGATACTCTACTGAAGGCATCGGCGTACATTCTGGGCGCCACCGGATCGAGCATAACGTACAAGGCGGTGCTGGAAGACGGCACGGCGTTTGCAGTGAGGAGAATCGGAGACGGCGGAGTGGAAAAATATAAAGATTTCGAGAGTCAGATTCGTGTTGTAGCTAAATTGGTTCACCCAAATTTGGTTCGTGTTCGTGGATTTTATTGGGGTGCTGATGAAAAGCTCATTATTTATGATTTTGTTCCTAATGGTAGCCTTGCCAATGCTCGTTACAGGAAAATGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATTGCAAAAGGATTGGCCCGTGGCCTTTCTTATCTCCACGACAAGAAGCATGTCCATGGCAACTTAAGGCCCACCAACATTCTTCTCGGCTTCGATATGGAGCCCAAGATAGGCGATTTCGGCCTTGACAAGCTCTTCTTGGGTGACTCCAGCTATAAACCCGGTGGCTCCACTCGAAATTTTGGGAGTAAAAGGTCTACAGCGTCTCGGGATAGCTTCCAAGATTTTGTCACCGGACCGAGCCCTGGACCGAGCCCGAGCTCCATCAGTGGGGTGTCGCCGTATTTAGCACCAGAGTCGCTTCGAAGCTTGAAGCCCAACTCGAAATGGGATGTCTACTCTTTTGGTGTGATATTGCTTGAGTTACTAACTGGAAAGATTGTAGTGTTGGATGAGTTGGGGCAAGGGCTTGGGCTTGCCAGCGAGGACAAGAGTCGAACCTTAAGAATGGCTGACATGGCGATTCGAGCAGACGTGGAAGGTAGAGAAGAAGCATTGTTGTCTTGCTTTAAATTAGGATATAGTTGTGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCCTTGCAAGTTTTGGAGAAATTTCCAACCATATCAATGTCATCACACTATTATGGTCTCTAG 2247 47.93 MTFILLLLLLLLLQSSCNGLNFDGILLLSFKYAVLDDPLFVLQNWNYSDDTPCSWRGVVCSADGSGGSRVTGLSLPSSQLMGSVSSDLGLIQNLQSVDLSNNSFNGSLPRSLFNATMLRFLDLSDNLISGEVPGPEGDLRNLQVLNLSGNALFGKFPSDLVNLSNLTVVSLKNNYISGAIPGGFKTVEVLDLSSNLINGSLPSDFGGDSLHYFNISYNRLSGEIPPDFAHKIPANAIIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTKTPCPITSSPSSLPPAIAAIPLDPSTPETTSPEKQSETGFKPSTIVAIVLGDVVGLAILCLLFFYVFHLKKKNKAVETHLKNEPNLAKDSWSTSSSESRGFSRWSCLRKTGDPEEANSDQASVLSFSGHRETAEEGAEENKRGILVTVDGGEKELELDTLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFESQIRVVAKLVHPNLVRVRGFYWGADEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLRIAKGLARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLDKLFLGDSSYKPGGSTRNFGSKRSTASRDSFQDFVTGPSPGPSPSSISGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIVVLDELGQGLGLASEDKSRTLRMADMAIRADVEGREEALLSCFKLGYSCASPAPQKRPSMKEALQVLEKFPTISMSSHYYGL 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10121719 10124415 - CePI673135_02g008410.1 Cec02g0841 195894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0841 748 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 185 735 IPR050647 -
Cec02g0841 748 Pfam Leucine Rich repeats (2 copies) 117 152 IPR025875 -
Cec02g0841 748 CDD STKc_IRAK 442 736 - -
Cec02g0841 748 SUPERFAMILY Protein kinase-like (PK-like) 441 734 IPR011009 -
Cec02g0841 748 Pfam Protein kinase domain 442 731 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0841 748 SUPERFAMILY L domain-like 29 271 - -
Cec02g0841 748 Pfam Leucine Rich Repeat 209 229 IPR001611 GO:0005515(InterPro)
Cec02g0841 748 Pfam Leucine Rich Repeat 93 114 IPR001611 GO:0005515(InterPro)
Cec02g0841 748 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515(InterPro)
Cec02g0841 748 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Cec02g0841 748 ProSiteProfiles Protein kinase domain profile. 436 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0841 748 MobiDBLite consensus disorder prediction 291 312 - -
Cec02g0841 748 MobiDBLite consensus disorder prediction 298 312 - -
Cec02g0841 748 Gene3D Phosphorylase Kinase; domain 1 408 511 - -
Cec02g0841 748 Gene3D Ribonuclease Inhibitor 185 280 IPR032675 -
Cec02g0841 748 Gene3D Ribonuclease Inhibitor 21 184 IPR032675 -
Cec02g0841 748 Gene3D Transferase(Phosphotransferase) domain 1 512 744 - -
Cec02g0841 748 MobiDBLite consensus disorder prediction 611 631 - -
Cec02g0841 748 FunFam Leucine-rich repeat receptor-like protein kinase 186 280 - -
Cec02g0841 748 FunFam Leucine-rich repeat receptor-like protein kinase 20 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0841 Cec-Chr2:10121719 Cec05g1201 Cec-Chr5:11034017 1.20E-152 dispersed
Cec02g0841 Cec-Chr2:10121719 Cec05g2466 Cec-Chr5:35796823 5.00E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71734 PF00069 Pkinase 2.10E-29 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0841 - - - 0.0