Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0847 GTCTCCTCATCCCTTGATGCTTTAACTGATATTAGTGGTGGAAAAGTAAACATCCATACACTTATGGCTCTTGCAGCCTTTGCTTCCATCTTTATGGGGAACGCCTTGGAAGGAGGACTTCTACTTGCCATGTTTAATTTGTCTCACATTGCGGAAGAGTATTTTACAAGTCGTGCAATGATTGATGTCAAAGAGTTGAAGGAAAACTATCCAGAATCTGCCCTTGTTTTAGATACAAATGATGGTAAACTTCCAAATATTACAGATTTATCCTACCAAAAGGTGCCTGTCCATGATATAGAGGTGGACTCCTATATATTGGTTGGAGCTGGTGAGGTTTTTGGCCTACTATTTATCTTGGGCTTCCATTGGGTGGCAATTCTCCTTCAGTTAATTTTTGGCAGCTTGTGGTGGAGAGATTTCAACATAAACTTCATAATTGGAAGTATGCTTATATTTCGAAAAGGGGCCGACACATGCTTATTTAGGGAAGGTTCTAGAGCCTCCAAGATAAAGCTTCCAAAAAAATATTGTGAAGTTTTCCAAGGTAGTGCCACAGTCACCATTGAGCACCTAACTGGTGAAATCAAACCATTGGAGATTACGGTTGGAAGCAGAGTTCCTGGTGGTGCAAGAAACTTGGATGGTAGGATAATCGTGAAGGCAACAAAGACCTGGAAAGAGTCAACTTTGAGTCGTATAGTGAACTTGACTGAAGAAGCACAACTGAATAAACCAAGACTTCAGAGGTGGCTTGATGAATTTGGTGAGCATTATAGCAAAGCAGTTGTAGTATTGGCCATTGCTATTGCCCTCGTTGGTCCAATATTATTCAAGTGGCCATTTATTGGTACATCAGCTTGTAGAGGATCGGTTTACAGAGCTCTAGGCCTCATGGTGGCAGCATCACCTTGTGCTTTGGCAGTTGCACCATTGGCTTATGCTATTGCAATTAGTTCCTGTGCAAGAAAGGGGATATTGTTGAAAGGTGGGCGTGTATTAGATGCTTTAGCTTCTTGTCACACTATAGCATTTGATAAAACTGGGACGTTGACTACTGGGGGGCTCATTTTCAAAGCGATTGAACCAATTTACGGACATGAGGTTGGAGAAAACAAATCAGACTTTGGTTCCTGTTGCATTCCCTGCTGTGAAGAAGAAGCTCTTGCTGTAGCAGCTGCCATGGAGAAGGGTACTACTCACCCCATTGGAAGAGCTGTGGTCGACCAAAGTATGGGAAAAGACCTCCCATCCTTTTCTGTCCAGGATTTGGAATATTTTCCGGGTAGAGGACTTGTTGCAACTCTGCATGGTACTGAGTCGGGAACTGAAGGTGGGAAACTATTGAAAGCATCTCTTGGGTCCTTAGATTTCATCACTTCATGCTACAAATCAGAAACCAAATCAAAAGAGATCAAAGAAGCTGCGAGCACATCTTCATATGGAAGTGAGTTTGTTCATGCTGCTCTTGCAGTTGATGGGAAGGTAACACTTATTCATCTTGAGGATCGACCTCATCCTGGAGTTTCAAGTGTAATAGCTGAATTAACAGATAGAGCTAAACTTCATGTAATGATGTTGACTGGAGATCATGAGTCAAGTGCACGGAGAGTGGCAAACGCAGTGGGCATCAAGGAAGTCCACTTCAGTCTAAAGCCTGAAGACAAGCTTAGTCACGTCAAAAGTATCTCTAGGGAGAATGGAGGAGGACTAATTATGGTTGGTGAAGGCATTAATGATGCACCAGCCCTTGCTGCTGCTACCGTAGGCATAGTGCTTGCTCAACGTGCTAGTGCAACTGCTATAGCTGTGGCTGATGTTCTGTTGCTGCGGGATAACATATCTGGTGTACCATTCTGTATTGCCAAGTCTCGCCAGACGACTGCCCTAGTTAAACAGAATGCTAGTCTTGCTTTGTTTTCAATATTTGTGGCCTCTCTTCCTGCAGTTCTAGGGTTTCTTCCCTTATGGTTAACGGTACTTCTGCACGAAGGTGGTACTCTTCTCGTTTGCCTCAATTCCATACGTGCTCTGAATAATCCTAGTTGGTCCTGGAAGCAGGACTTGAAGCAATTGCTAATGGAGCTGAAATTTAAAGGCTCGCAGCCTAGCCATAATACCAGCTCTACTACTCTACAATCTTCCCCTAAAAAGGTCCAAGGTCCAGAAATTGGGAGATTTGAGTTAGGGTTTAAAATCAAAGAAGGTTCTCCCTCTATCCTATGTTGGGTTATCCTAATCAATTCTATCAATAAGAAGCAGCCCAAGATGAAAATCCAACTACCACACGCAAAAGGGCAATGGAAAAGGAGGTGA 2316 43.13 VSSSLDALTDISGGKVNIHTLMALAAFASIFMGNALEGGLLLAMFNLSHIAEEYFTSRAMIDVKELKENYPESALVLDTNDGKLPNITDLSYQKVPVHDIEVDSYILVGAGEVFGLLFILGFHWVAILLQLIFGSLWWRDFNINFIIGSMLIFRKGADTCLFREGSRASKIKLPKKYCEVFQGSATVTIEHLTGEIKPLEITVGSRVPGGARNLDGRIIVKATKTWKESTLSRIVNLTEEAQLNKPRLQRWLDEFGEHYSKAVVVLAIAIALVGPILFKWPFIGTSACRGSVYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGRVLDALASCHTIAFDKTGTLTTGGLIFKAIEPIYGHEVGENKSDFGSCCIPCCEEEALAVAAAMEKGTTHPIGRAVVDQSMGKDLPSFSVQDLEYFPGRGLVATLHGTESGTEGGKLLKASLGSLDFITSCYKSETKSKEIKEAASTSSYGSEFVHAALAVDGKVTLIHLEDRPHPGVSSVIAELTDRAKLHVMMLTGDHESSARRVANAVGIKEVHFSLKPEDKLSHVKSISRENGGGLIMVGEGINDAPALAAATVGIVLAQRASATAIAVADVLLLRDNISGVPFCIAKSRQTTALVKQNASLALFSIFVASLPAVLGFLPLWLTVLLHEGGTLLVCLNSIRALNNPSWSWKQDLKQLLMELKFKGSQPSHNTSSTTLQSSPKKVQGPEIGRFELGFKIKEGSPSILCWVILINSINKKQPKMKIQLPHAKGQWKRR 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10335609 10359481 - CePI673135_02g008470.1 Cec02g0847 195900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0847 771 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 178 710 IPR051949 -
Cec02g0847 771 SUPERFAMILY Calcium ATPase, transduction domain A 180 237 IPR008250 -
Cec02g0847 771 Pfam E1-E2 ATPase 178 324 - -
Cec02g0847 771 SFLD p-type atpase 326 627 IPR044492 -
Cec02g0847 771 NCBIfam HAD-IC family P-type ATPase 480 654 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec02g0847 771 NCBIfam HAD-IC family P-type ATPase 178 367 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec02g0847 771 SUPERFAMILY HAD-like 342 674 IPR036412 -
Cec02g0847 771 ProSitePatterns E1-E2 ATPases phosphorylation site. 346 352 IPR018303 -
Cec02g0847 771 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 657 IPR023298 -
Cec02g0847 771 Gene3D - 355 505 IPR023299 GO:0000166(InterPro)
Cec02g0847 771 NCBIfam heavy metal translocating P-type ATPase 178 676 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Cec02g0847 771 Gene3D - 56 242 - -
Cec02g0847 771 MobiDBLite consensus disorder prediction 700 718 - -
Cec02g0847 771 SFLD Haloacid Dehalogenase 326 627 - -
Cec02g0847 771 PRINTS P-type cation-transporting ATPase superfamily signature 574 593 - -
Cec02g0847 771 PRINTS P-type cation-transporting ATPase superfamily signature 344 358 - -
Cec02g0847 771 PRINTS P-type cation-transporting ATPase superfamily signature 598 610 - -
Cec02g0847 771 PRINTS P-type cation-transporting ATPase superfamily signature 520 530 - -
Cec02g0847 771 MobiDBLite consensus disorder prediction 700 719 - -
Cec02g0847 771 Pfam haloacid dehalogenase-like hydrolase 342 587 - -
Cec02g0847 771 Gene3D - 337 625 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0780 Cec-Chr2:8893104 Cec02g0847 Cec-Chr2:10335609 5.30E-282 dispersed
Cec02g0847 Cec-Chr2:10335609 Cec05g1746 Cec-Chr5:29055431 4.10E-42 dispersed
Cec11g1242 Cec-Chr11:25962783 Cec02g0847 Cec-Chr2:10335609 1.20E-06 dispersed
Cec02g0847 Cec-Chr2:10335609 Cec06g1557 Cec-Chr6:29140392 1.20E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0847 K01534 - mdm:103453726 831.247