Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0867 ATGGACTACTCTCCACCAAACTGGAACTGGCTCTTCGATTACTATACAATGGATGATCTCCCCGTCGTCGACGCCCACTTCTCGCCGCCGCAGTCCATCAGTTTCTCCTGGTCCAATCCCTCCATCAACTTTTCATCTCAACACAGCCTTGAGGTAGATTGCTCATATGAAGATCTGGACAGCTCAAAGGAAATGGGTCGGAAACGGCTAAGGGGTGAAACAAGTGCTGCATCTACCTCCAAAGCCTGCAGAGAGAAACAGAGGAGAGATAAGCTGAATGAGAGGTTCTTGGAATTGGCTACTGTCCTGGAACCTGGAAAACCACCCAAAACCGACAAGGTTGCAATCTTGAGTGATGCTATCAGAATGATGTCCGATTTACAATGTGAAACTCAGAAGCTGAGAGAATCGATGGAGGATTTGAAGGCAAAAATCAAAGAACTAAAGGTTGAGAAAAATGAACTTCGTGATGAGAAGCAAAGGTTGAGAGCAGAGAAAGAAAATTTGGAGCTGCAAATCAAAGCAGTGAATACTCGAGCAGCTGACATCCAGCATCCTCCCCCTACACTTTCAGCTGCATTTACAGCACAAGGGCAAGTGGCTGGTAACAAGTTGATGCCTTTCATTGGTTATCCTGGCATTGCCATGTGGCAGTTCTTGCCGCCTGCAGCTGTTGACATATCACAGGATCATGTGCTCCGCCCACCAGTTGCTTAA 717 47.0 MDYSPPNWNWLFDYYTMDDLPVVDAHFSPPQSISFSWSNPSINFSSQHSLEVDCSYEDLDSSKEMGRKRLRGETSAASTSKACREKQRRDKLNERFLELATVLEPGKPPKTDKVAILSDAIRMMSDLQCETQKLRESMEDLKAKIKELKVEKNELRDEKQRLRAEKENLELQIKAVNTRAADIQHPPPTLSAAFTAQGQVAGNKLMPFIGYPGIAMWQFLPPAAVDISQDHVLRPPVA 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10780595 10783428 + CePI673135_02g008670.1 Cec02g0867 195920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0867 238 PANTHER BHLH TRANSCRIPTION FACTOR 10 238 IPR044818 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006879(InterPro)|GO:0046983(InterPro)
Cec02g0867 238 FunFam Transcription factor bHLH34 67 125 - -
Cec02g0867 238 Pfam Helix-loop-helix DNA-binding domain 79 128 IPR011598 GO:0046983(InterPro)
Cec02g0867 238 Coils Coil 124 179 - -
Cec02g0867 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 127 IPR011598 GO:0046983(InterPro)
Cec02g0867 238 SMART finulus 82 133 IPR011598 GO:0046983(InterPro)
Cec02g0867 238 Gene3D - 79 152 IPR036638 GO:0046983(InterPro)
Cec02g0867 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 152 IPR036638 GO:0046983(InterPro)
Cec02g0867 238 CDD bHLH_AtILR3_like 81 156 - -
Cec02g0867 238 MobiDBLite consensus disorder prediction 68 87 - -
Cec02g0867 238 CDD bZIP 142 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0867 Cec-Chr2:10780595 Cec10g0552 Cec-Chr10:6727668 1.10E-59 dispersed
Cec02g0867 Cec-Chr2:10780595 Cec05g1652 Cec-Chr5:27116955 7.70E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29024 PF00010 HLH 4.20E-11 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0867 - - - 0.0