Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0880 ATGGGGAGGCTTACTTCTTTGGTGTTGGCCACTATAGTTGGTCTTCTAGCCCTGATAGGCTCCACTCAAGCTCAGTTGCAGCTTGGTTTCTATGCCAAAAGCTGCCCAAACGCTGAGAAGATTGTGCTGGATTTCGTTCACCAGCATATCCACAATGCCCCTTCACTGGCAGCAACTTTCATTAGAATGCACTTCCATGATTGCTTTGTCAGGGGTTGTGATGGATCTGTGCTTATAAACTCCACCTCAAATAACCAAGCTGAGAAGGATTCTCAACCAAATCAAACACTCAGAGGTTTTGACTTCATTGATAGAGTCAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTGGTCTCTTGCGCAGATGTTCTTTCCTTGGTTGCAAGAGATACCATTGTAGCCACAGGAGGTCCATACTGGGAAGTTCCAACTGGCCGAAGGGATGGAGTAATCTCAAGATCATCAGAAGCCTTGAATAACATTCCTCCTCCATTTGGGAACCTTTCCACACTTCAAAGACTTTTCGCAAACCAAGGCCTTGATCTAAAAGACTTGGTGCTACTATCTGGCGCTCACACAATCGGTATCGCACACTGCTCATCATTCAGAAACCGACTCTACAATTTCACCGGCGTCGGAGACCAAGATCCCTCTCTGGACCCAAGATACGCCGCTAATCTGAAGGCCAACAAATGCAAAACTCCGACCGACAACAGCAAAGTGGAAATGGACCCTGGAAGTCGCAACACTTTTGACCTTAGCTACTATTCTCTTCTACTAAAAAGGAGGGGCCTCTTCGAATCCGATGCTGCTCTCACTACAGACGCGACTACATTGGGTTTAGTTCAGAAACTGGTACAAGGACCCATTGAAGAATTCTTCGCTGAATTTGCAGCATCCATGGAGAAAATGGGTCGGATTAAAGTGAAGACTGGAACTGAAGGTGAAATCAGAAGGAGATGCGCTGTGGTGAATAGTTGA 981 46.28 MGRLTSLVLATIVGLLALIGSTQAQLQLGFYAKSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDGSVLINSTSNNQAEKDSQPNQTLRGFDFIDRVKSLLEAECPGVVSCADVLSLVARDTIVATGGPYWEVPTGRRDGVISRSSEALNNIPPPFGNLSTLQRLFANQGLDLKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDAALTTDATTLGLVQKLVQGPIEEFFAEFAASMEKMGRIKVKTGTEGEIRRRCAVVNS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10974651 10975966 - CePI673135_02g008800.1 Cec02g0880 195933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0880 326 FunFam Peroxidase 29 172 - -
Cec02g0880 326 Gene3D Peroxidase, domain 2 162 304 - -
Cec02g0880 326 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PANTHER PEROXIDASE 25-RELATED 20 321 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cec02g0880 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 Gene3D - 29 325 - -
Cec02g0880 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cec02g0880 326 FunFam Peroxidase 162 304 - -
Cec02g0880 326 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec02g0880 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Cec02g0880 326 Pfam Peroxidase 44 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec02g0880 326 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0186 Cec-Chr2:1766797 Cec02g0880 Cec-Chr2:10974651 1.10E-74 dispersed
Cec02g0187 Cec-Chr2:1775551 Cec02g0880 Cec-Chr2:10974651 3.90E-92 dispersed
Cec02g0880 Cec-Chr2:10974651 Cec06g0554 Cec-Chr6:6164893 1.20E-78 dispersed
Cec02g0185 Cec-Chr2:1760371 Cec02g0880 Cec-Chr2:10974651 1.70E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0880 K00430 - csv:101213629 610.142