Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0919 ATGACCCTCCCACTGTCGCTACGCGATTCTTTTAGCTCAGTGACTGGAGTGTGGTTTGATAGCTCTCGAGGAAAAAAACTCTGCGGTTCAGTGATTCTTAGCTTTGACAAGCAGATCATAGTGGTTGGTAGACATTGTCGGAGAACTGCTCGGAGTTGTAAGCGTCGATCAACAATGATTGATGGGATCATCGGCGCAACCAGCACCACGTTGTTAAACAGCTTTTGGGCGTCAAATCGGATGCGTGCATTAATTGGGAACAGGGTCCTATTTTGGCTTAAAATCCTCTCCGATCTCCAGCACTGTGAAAGCTTGAATCAATTAGTAGACTTCCTGGTCCAGGGCTGGCCTGCAGTTGTGAACATTGGTGCAGTTTTCACTTTTGATTCAATTATAGGAAGAGTGGCGAAGGTGGCAATGGAAGCTGCAGTTTCGGATGTGAATGCAGATCCTTCCATTCTCAATGGAACAAAGCTGAATTTGGTCATGGCAGATACACATTGTAATGTTCTCTTGGGTTCTATTGGAGCTTTCCAGGTTCTTGAGAAAGATGTAGTAGCCATAGTTGGGCCTCAATCTTCAGTTGTAGCTCATATGGTTCTACAGATTGCTAATAATCTCCAAGTGCCTCTTATATCATTTGCTGCCACTGACCCAACTTTATCTGCTCTCCAATTCCCCTTCTTCCTAAGAACTACTCAGAGTGATGCCTACCAAATGACTGCTATGGCAGATTTAATTGACTTTTATGAGTGGAAGGAGGTGATCATGATCTTTGTGGATGATGATTATGGTAGAAATGGAATATCCACTTTAACTGATGAGCTTGACAAAAGGATGTTTAAAATTTCTTACAAAATACCCTTACCTTCTCATTTTAATCTCAGTGAAATCACAGTCATGCTCAATAAATCCAAGTTGCTCGGTCCTCGTGTCTATGTTGTTCATGTCAATCCTGATCCTAGATTAAGTATCTTCAAAATAGCCCATCAACTTGATATGATGACAAGTGATTATGTGTGGCTGGCAACAGATTGGCTTTCTACTACCTTAGATTCTGTTCTGCCTGTGCAACCAACCTCTATAGACATCCTTCAAGGCGTGGTTGTACTTCGTCAACATATTCCTGAATCTAACCAACAAACAACATTATGGTCTCGGTTAAGGAAGATGCTGCCAGAAGGCTCCAGAAATTCTTCGTTGAATGTCTATGCTCTTAGTGCCTATGATACGATTCAAGTAGCTGCACGTGCAATTGATAAGTTTCTAAACGAAGGTAGGAGCATTACCTTCTCATTGAAGAACAAGTTTCATGATTTAAATACATCTAGAATGCCATGGGGAAAGCTCAAAATATTTGATGATGGTGCTCTTCTTTTGAGCATATTGTTGCAGGCAAACTTTACTGGTTTAAGTGGTCAGATTGAGTTTAATTCAGATCGGAACCTTGTCAATAGAGGCTATGAGGTGATCAATATTGATCAGACGGGACTGCGTAGAGTTGGTTATTGGTCCAATGTCACAGGCTTTACAATCCAATCCCCAGAAACTCTGAAGCAGAAACGAATTAGTTATTCCCACCTGAACCAGGCTCTTGGCAATGTTACCTGGCCTGGTGGAAAGACAGAAAGACCGCGTGGATGGGTGATTGCAGACAATGAAAGACCATTAATAATTGGAGTGCCACGTAGAGTAAGTTTCATTGAATTTGTTACTGCAGTCAATGGAAGCCACGAAAACATTGAAGGATTCTGTATCGATCTGTTCAATGAAGCAAGAAAGCTGGTTCCTTATGATGTTCCTTACAGATTTATACCTTTTGGAAATGGCTACTCCAATCCTAGTTATGATGACCTTGTGAAGAACGTTGCAAATGGTATATTTGATGCAGCTGTTGGAGATATTGCAATTGTTACCAATCGAACAAGGATTGTGGATTTTTCTCAGCCTTTTGCTTCTACCGGGCTTGTTATTGTGGCTCCAATAAAAAATTCAAAGTCAAATGCTTGGGTGTTCCTTAAACCATTTACAACAGAGATGTGGTGCGTAACATCGGCGTCCTTTTTTATGATTGGGGCAGTCATATGGCTTCTTGAGCATCGAGTAAATGATGATTTCCGTGGTCCACCAAAGAGGCAGCTAGTGACAGTAATACTGTTCAGCTTCTCGACATTGTTCAAAACGAATCAGGAAGCTACTGTAAGTCCACTTGGACGTATGGTAATGGTGGTGTGGCTTTTCTTATTGATGGTTATCACGTCAAGCTATACAGCCAGTCTCACTTCAATCCTTACAGTTCAGCAGCTTTCATCTCCCATTAAAGGACTTGATGACTTGATTACTAATGAACAGCCAATTGGCTACCAGGTAGGATCCTTTGCGTATAGCTATCTGACCGAGAGTCTTTACCTTCCACGATCGAGGCTTGTATCTCTAGGCTCTCCAGAAGAGTATGAATCAGCACTGCTAAAGGGGCCATTCAAAAAAGGAGGGGTGGCGGCTATTGTAGATGAACTTCCATATATGGAATTGTTCTTATCAGGGAGGAATGATTTCGGAATGATTGGACAGCCATTCACCAAGAGTGGATGGGGATTTGCTTTTCAGAGAGGATCTCCACTTGCGGTAGACATGTCAACTGCAATTCTAAAGCTTTCTGAGAATGGAAAGCTTCAGAAGATCCACGAGAAGTGGTTTTGTAAGATGGGTTGTCCTGGAGAGAGGAGAAGGAAGTCTGAGCCTAACCAGCTTCAGTTGATCAGCTTCTGGGGTCTGTATCTCTTGTGCGGTGCCTTTTCACTCGTTGCTCTTCTTATATTTTTGCTCCGCATAGTTCGACAATTTGCTCGTTACATACGACAACAGAAGGAATCTTCTAATGCAGAATTGGTGTCATCAAATTCAAACTCAAGCTGGACTCAGGTTATATATAAGTTTATTGACTTTGTTGATGAGAAGGAAGAAGCCATCAAGAGACTTTTTCGAAAGTATGATAATCAGAATCAGGCTAGCCAATAG 3018 41.92 MTLPLSLRDSFSSVTGVWFDSSRGKKLCGSVILSFDKQIIVVGRHCRRTARSCKRRSTMIDGIIGATSTTLLNSFWASNRMRALIGNRVLFWLKILSDLQHCESLNQLVDFLVQGWPAVVNIGAVFTFDSIIGRVAKVAMEAAVSDVNADPSILNGTKLNLVMADTHCNVLLGSIGAFQVLEKDVVAIVGPQSSVVAHMVLQIANNLQVPLISFAATDPTLSALQFPFFLRTTQSDAYQMTAMADLIDFYEWKEVIMIFVDDDYGRNGISTLTDELDKRMFKISYKIPLPSHFNLSEITVMLNKSKLLGPRVYVVHVNPDPRLSIFKIAHQLDMMTSDYVWLATDWLSTTLDSVLPVQPTSIDILQGVVVLRQHIPESNQQTTLWSRLRKMLPEGSRNSSLNVYALSAYDTIQVAARAIDKFLNEGRSITFSLKNKFHDLNTSRMPWGKLKIFDDGALLLSILLQANFTGLSGQIEFNSDRNLVNRGYEVINIDQTGLRRVGYWSNVTGFTIQSPETLKQKRISYSHLNQALGNVTWPGGKTERPRGWVIADNERPLIIGVPRRVSFIEFVTAVNGSHENIEGFCIDLFNEARKLVPYDVPYRFIPFGNGYSNPSYDDLVKNVANGIFDAAVGDIAIVTNRTRIVDFSQPFASTGLVIVAPIKNSKSNAWVFLKPFTTEMWCVTSASFFMIGAVIWLLEHRVNDDFRGPPKRQLVTVILFSFSTLFKTNQEATVSPLGRMVMVVWLFLLMVITSSYTASLTSILTVQQLSSPIKGLDDLITNEQPIGYQVGSFAYSYLTESLYLPRSRLVSLGSPEEYESALLKGPFKKGGVAAIVDELPYMELFLSGRNDFGMIGQPFTKSGWGFAFQRGSPLAVDMSTAILKLSENGKLQKIHEKWFCKMGCPGERRRKSEPNQLQLISFWGLYLLCGAFSLVALLIFLLRIVRQFARYIRQQKESSNAELVSSNSNSSWTQVIYKFIDFVDEKEEAIKRLFRKYDNQNQASQ 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12031095 12037252 + CePI673135_02g009190.1 Cec02g0919 195972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0919 1005 Coils Coil 983 1003 - -
Cec02g0919 1005 Gene3D - 669 801 - -
Cec02g0919 1005 PIRSF IGluLR_plant 85 1005 IPR017103 -
Cec02g0919 1005 FunFam Glutamate receptor 235 391 - -
Cec02g0919 1005 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 120 962 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
Cec02g0919 1005 FunFam Glutamate receptor 795 903 - -
Cec02g0919 1005 Gene3D - 235 509 - -
Cec02g0919 1005 FunFam Glutamate receptor 669 799 - -
Cec02g0919 1005 Pfam Receptor family ligand binding region 137 494 IPR001828 -
Cec02g0919 1005 CDD GluR_Plant 555 899 - -
Cec02g0919 1005 FunFam Glutamate receptor 552 669 - -
Cec02g0919 1005 SMART GluR_14 558 901 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Cec02g0919 1005 CDD PBP1_GABAb_receptor_plant 121 511 IPR044440 -
Cec02g0919 1005 Gene3D - 138 485 - -
Cec02g0919 1005 SUPERFAMILY Periplasmic binding protein-like II 532 899 - -
Cec02g0919 1005 Pfam Ligand-gated ion channel 900 930 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Cec02g0919 1005 Pfam Bacterial extracellular solute-binding proteins, family 3 578 677 IPR001638 -
Cec02g0919 1005 SUPERFAMILY Periplasmic binding protein-like I 115 549 IPR028082 -
Cec02g0919 1005 Gene3D - 565 668 - -
Cec02g0919 1005 Gene3D - 847 906 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0919 Cec-Chr2:12031095 Cec11g1930 Cec-Chr11:33463121 1.30E-261 dispersed
Cec02g0919 Cec-Chr2:12031095 Cec02g0195 Cec-Chr2:1838873 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0919 K05387 - csv:101215715 1671.37