Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0951 ATGGCGGATTCTGATAACGAATCTGGAGGTCACAACAGCAACGCGAACAGCGAGCTGTCGGCGAAGGAGCAGGACAGATTCTTGCCGATAGCGAACGTAAGCAGGATCATGAAGAAGGCGTTACCAGCAAACGCGAAGATCTCGAAAGATGCAAAAGAAACTGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATAACGGGAGAGGCATCGGACAAGTGCCAGAGAGAGAAAAGAAAGACAATCAACGGCGACGATTTGTTGTGGGCCATGACCACGCTTGGATTCGAAGAGTATGTGGAACCACTCAAGACTTATCTGCAGAAGTACAGGGAAATGGAAGGGGAAAAGAGCACTATGGGGAGACAGGGGGAGAAAGACGGTACTGGTGGTGGGACCGGCGGCAGTGGGACAAATAGTGGTGGTGGTGGAGTCAACTCTGGTACTGCTGGTGGTGGTGGTGGTGGCGGCGGTGGATTTAACGGAGTGGGTGGAATTTATGGTGGGATGATGATGATGGGGCATCATCAGGGAGGCGTTTATGGTGCTGGTGGATTTCACCATATGGGAATTGGCGGTGGGAAGGGTGGAAGTGGTGGTTCCGGCACCGGACACCGGTAG 621 52.66 MADSDNESGGHNSNANSELSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKTYLQKYREMEGEKSTMGRQGEKDGTGGGTGGSGTNSGGGGVNSGTAGGGGGGGGGFNGVGGIYGGMMMMGHHQGGVYGAGGFHHMGIGGGKGGSGGSGTGHR 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13010460 13011080 - CePI673135_02g009510.1 Cec02g0951 196004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0951 206 MobiDBLite consensus disorder prediction 1 21 - -
Cec02g0951 206 MobiDBLite consensus disorder prediction 132 146 - -
Cec02g0951 206 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
Cec02g0951 206 MobiDBLite consensus disorder prediction 114 155 - -
Cec02g0951 206 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Cec02g0951 206 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Cec02g0951 206 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Cec02g0951 206 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 10 127 IPR027113 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0001228(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER)|GO:0016602(PANTHER)|GO:0016602(InterPro)
Cec02g0951 206 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec02g0951 206 FunFam Nuclear transcription factor Y subunit B-3 16 139 - -
Cec02g0951 206 SUPERFAMILY Histone-fold 24 129 IPR009072 GO:0046982(InterPro)
Cec02g0951 206 Gene3D Histone, subunit A 15 134 IPR009072 GO:0046982(InterPro)
Cec02g0951 206 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0951 Cec-Chr2:13010460 Cec07g1022 Cec-Chr7:24883369 1.60E-46 dispersed
Cec02g0951 Cec-Chr2:13010460 Cec02g1461 Cec-Chr2:32002614 3.20E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29031 PF00808 CBFD_NFYB_HMF 2.00E-27 CL0012 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0951 K08065 - csv:101219076 255.758