Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0973 ATCACCACCAAGATGCCAGCTGAAAACTCAATTCCATTTGATCGAGATGCAGAGCCTTTTGTTGAGGTTGATCCAACTGGAAGGTTTGGACGATACGACGATCTTCTTGGGTCTGGAGCGGTAAAGAGAGTTTATAGGGCATTCGATCAGGAGGAAGGAATAGAGGTTGCTTGGAATCAGGTTCGATTGAGAAATTTTAGTGGGGATCCAGTGTTCATCAACCGCTTGAGGTCTGAGGTTCAGCTGCTGAGTACTTTAAACAACAAATATATCATTGTTTGTTACAGTGTTTGGAATGACGACGAGCGTAATACGTTGAATTTCATTACTGAGGTGTGCACATCAGGAAATCTGAGGGATTATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAAAAATGGTCAAAGCAAGTACTCGAGGGATTGGATTATCTTCATACTCATGAGCCTTGCATTATTCACAGAGACCTCAACTGCAGTAACATATTTGTCAATGGGAACATTGGCCAGGTTAAAATAGGCGATCTAGGGTTTGCAGCTATAGTCGGCAGGAGTCATGCTGCACATTCAATCATAGGCACACCAGAGTATATGGCACCAGAGCTGTATGAGGAAGACTACACAGAGATGGTGGATATATACTCCTTTGCGATGTGTCTGCTTGAGATGGTTACGATGGAGATACCATACAGTGAATGTGATAGTGTTGCCAAGATATACAAGAAGGTCACAACTGGAATAAAGCCCCAAGCAATATCCAAAGTGACTGATGATGAAGTCAGGGCTTTCATTGAGAAGTGCATTGCACAGCCAAGGGCAAGACCTTCCGCTTCTGAACTTCTCAAAGATCCATTCTTTGACGAAGTGAGGGATGAAGATTCTGAACAGAGTTATTAA 903 42.86 ITTKMPAENSIPFDRDAEPFVEVDPTGRFGRYDDLLGSGAVKRVYRAFDQEEGIEVAWNQVRLRNFSGDPVFINRLRSEVQLLSTLNNKYIIVCYSVWNDDERNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSVAKIYKKVTTGIKPQAISKVTDDEVRAFIEKCIAQPRARPSASELLKDPFFDEVRDEDSEQSY 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13959840 13963010 + CePI673135_02g009730.1 Cec02g0973 196026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0973 300 Gene3D Transferase(Phosphotransferase) domain 1 113 294 - -
Cec02g0973 300 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0973 300 FunFam Probable serine/threonine-protein kinase WNK1 15 111 - -
Cec02g0973 300 CDD STKc_WNK 28 288 - -
Cec02g0973 300 Gene3D Phosphorylase Kinase; domain 1 14 111 - -
Cec02g0973 300 ProSiteProfiles Protein kinase domain profile. 30 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0973 300 SUPERFAMILY Protein kinase-like (PK-like) 23 289 IPR011009 -
Cec02g0973 300 FunFam probable serine/threonine-protein kinase WNK9 113 294 - -
Cec02g0973 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 290 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0973 Cec-Chr2:13959840 Cec10g0455 Cec-Chr10:5435455 1.20E-125 dispersed
Cec02g0973 Cec-Chr2:13959840 Cec02g1719 Cec-Chr2:34930948 1.20E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71737 PF00069 Pkinase 4.60E-50 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0973 K08867 - csv:101222153 593.193