Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g1110 | TTGAGGAACAATTGCTCCAACCAATCTCTCCAAAGGAGTAACGACAACAAACAAGGCGTTGAAAGGCATTCCCGCGCCGAGATGGGGTCATTAGGCGAGAAAACCATATTGGAATTTGAAGATGAGAGCCTTGTTAGTCCTGTATCATTAAACAGAAAGAACTTTTCTATTGAGGGATCTATCCATAGTTCTACATTGGGTGGTGGTTCGCAGAAACTTAGTTACAGTAACATGAAGAACAGGGTATTTGGCAGCATTAAGATTGTCGTCTTCTCTGCTAAAATAAACCTTCTCATGCCTTTTGGGCCTTTAGCAATAATAGTCAGCACTTTATCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTTGCTGAGCGTTTGGGATATGCAACTGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCTACAGAATTGATAATATCAATATATGCATTGCGAAGAGGAATGATCCGTGTTGTTCAACAGTCATTATTAGGTTCAATTTTGTCTAATATGTTATTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTTCTAAGAGAGAGCAGGTCTTCAGTAAGGCAGCTGCTACAGTGAATTCTGGATTGCTGTTAATGGCGGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCAACACACACAGAGTTGCACTCTGGAAAGTCAGAGTTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTTGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGTGATAAGAACTTATATCTCCCGGTTGACGAGGGGGATAATGAAGGGAGTTCTTCTGATGATGAAGAAACTCCTGAGATTACCATGTGGGAATCCATTATTTGGCTGTCTATCTTGACCATTTGGATTTCCGTCCTCTCTGAATACTTGGTTAATGCAATCGAGGGGGCATCGGTTGCAATGAACATACCAGTAGCATTCATTAGTGTTATCCTACTACCTATTGTTGGGAATGCTGCAGAGCATGCAGGTGCCATCATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTCGCAATAGGATCATCGACACAGATATCTATGTTTGGGATTCCTTTTTGTGTGGTCATTGGTTGGATCATGGGATGTCCTATGGACTTGAATTTTCAGCTTTTTGAAACCGCCACGCTTTTCATCACGGTCATTGTTGTGGCCTTCATGTTGCAGGATGGAACTTCTAATTACCTCAAAGGACTAATGCTTATTCTCTGCTACCTGATAGTAGCTGCGAGTTTCTTTGTACATATTGACCCAGCATCAGTTGGTAAGCTTTCACTCCCTTTGCTACAACTGGGAATCTGCAAACAAAATGGAAGCTATTCAATGCCCTACAAAACTAACAGTCGAACCATGAAAATCAAAACTTTTACACAGGAGACAAGACCCGAAAACCTGGTGTATGAAAGGCAAGGGACGACTCAAAGAAGTGAATCTGCCTGCACTAGTACTCTCTTGAAGATGGGATTGACCGAAGCTCGAGGTTCACTCCATTGCTGTATAGTTCTGAATTCAGGCTACAACCTTGTTCAGAAATCATTTTTCCATGTTTTGGGACAACCAATGGCAATAGATGTTTCCTTGATTCTTCCAGTCGTTGGTGCTGATCTTGTTTTATCATTGCAAGCTTTGGCAAATACTCACAACTTAGCAACTAGGAATGCTAGATATTGA | 1776 | 41.84 | LRNNCSNQSLQRSNDNKQGVERHSRAEMGSLGEKTILEFEDESLVSPVSLNRKNFSIEGSIHSSTLGGGSQKLSYSNMKNRVFGSIKIVVFSAKINLLMPFGPLAIIVSTLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVSKREQVFSKAAATVNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSDKNLYLPVDEGDNEGSSSDDEETPEITMWESIIWLSILTIWISVLSEYLVNAIEGASVAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVGKLSLPLLQLGICKQNGSYSMPYKTNSRTMKIKTFTQETRPENLVYERQGTTQRSESACTSTLLKMGLTEARGSLHCCIVLNSGYNLVQKSFFHVLGQPMAIDVSLILPVVGADLVLSLQALANTHNLATRNARY | 591 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24132864 | 24138035 | + | CePI673135_02g011100.1 | Cec02g1110 | 196163 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g1110 | 591 | FunFam | Vacuolar cation/proton exchanger | 293 | 449 | - | - | |
Cec02g1110 | 591 | FunFam | Vacuolar cation/proton exchanger | 146 | 285 | - | - | |
Cec02g1110 | 591 | PANTHER | VACUOLAR CALCIUM ION TRANSPORTER | 56 | 453 | IPR004713 | GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER) | |
Cec02g1110 | 591 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Cec02g1110 | 591 | NCBIfam | calcium/proton exchanger | 99 | 448 | IPR004798 | GO:0006816(InterPro)|GO:0015369(InterPro) | |
Cec02g1110 | 591 | Gene3D | - | 290 | 449 | IPR044880 | - | |
Cec02g1110 | 591 | Gene3D | - | 145 | 285 | IPR044880 | - | |
Cec02g1110 | 591 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cec02g1110 | 591 | Pfam | Sodium/calcium exchanger protein | 305 | 447 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec02g1110 | 591 | Pfam | Sodium/calcium exchanger protein | 116 | 272 | IPR004837 | GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1110 | Cec-Chr2:24132864 | Cec10g0414 | Cec-Chr10:4972194 | 5.90E-158 | dispersed | |
Cec02g1110 | Cec-Chr2:24132864 | Cec04g0836 | Cec-Chr4:28101446 | 5.10E-93 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g1110 | K07300 | - | csv:101215915 | 825.083 |