Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1110 TTGAGGAACAATTGCTCCAACCAATCTCTCCAAAGGAGTAACGACAACAAACAAGGCGTTGAAAGGCATTCCCGCGCCGAGATGGGGTCATTAGGCGAGAAAACCATATTGGAATTTGAAGATGAGAGCCTTGTTAGTCCTGTATCATTAAACAGAAAGAACTTTTCTATTGAGGGATCTATCCATAGTTCTACATTGGGTGGTGGTTCGCAGAAACTTAGTTACAGTAACATGAAGAACAGGGTATTTGGCAGCATTAAGATTGTCGTCTTCTCTGCTAAAATAAACCTTCTCATGCCTTTTGGGCCTTTAGCAATAATAGTCAGCACTTTATCTGGTCACCATGGTTGGGTCTTCCTTTTAAGCTTGTTGGGGATCATACCTCTTGCTGAGCGTTTGGGATATGCAACTGAACAACTGGCATGCTATACTGGAGCCACAGTTGGAGGTCTTCTGAATGCTACTTTTGGAAATGCTACAGAATTGATAATATCAATATATGCATTGCGAAGAGGAATGATCCGTGTTGTTCAACAGTCATTATTAGGTTCAATTTTGTCTAATATGTTATTAGTACTTGGATGTGCCTTCTTTGCTGGTGGAGTTGTGGTTTCTAAGAGAGAGCAGGTCTTCAGTAAGGCAGCTGCTACAGTGAATTCTGGATTGCTGTTAATGGCGGTAATGGGACTTCTATTTCCTGCTGTCCTTCGTTCAACACACACAGAGTTGCACTCTGGAAAGTCAGAGTTGGCTCTTTCAAGATTTAGTAGCGGCATTATGTTGGTTGCATATGCTGCCTATCTTGTTTTTCAGTTGAAAAGTGATAAGAACTTATATCTCCCGGTTGACGAGGGGGATAATGAAGGGAGTTCTTCTGATGATGAAGAAACTCCTGAGATTACCATGTGGGAATCCATTATTTGGCTGTCTATCTTGACCATTTGGATTTCCGTCCTCTCTGAATACTTGGTTAATGCAATCGAGGGGGCATCGGTTGCAATGAACATACCAGTAGCATTCATTAGTGTTATCCTACTACCTATTGTTGGGAATGCTGCAGAGCATGCAGGTGCCATCATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTCGCAATAGGATCATCGACACAGATATCTATGTTTGGGATTCCTTTTTGTGTGGTCATTGGTTGGATCATGGGATGTCCTATGGACTTGAATTTTCAGCTTTTTGAAACCGCCACGCTTTTCATCACGGTCATTGTTGTGGCCTTCATGTTGCAGGATGGAACTTCTAATTACCTCAAAGGACTAATGCTTATTCTCTGCTACCTGATAGTAGCTGCGAGTTTCTTTGTACATATTGACCCAGCATCAGTTGGTAAGCTTTCACTCCCTTTGCTACAACTGGGAATCTGCAAACAAAATGGAAGCTATTCAATGCCCTACAAAACTAACAGTCGAACCATGAAAATCAAAACTTTTACACAGGAGACAAGACCCGAAAACCTGGTGTATGAAAGGCAAGGGACGACTCAAAGAAGTGAATCTGCCTGCACTAGTACTCTCTTGAAGATGGGATTGACCGAAGCTCGAGGTTCACTCCATTGCTGTATAGTTCTGAATTCAGGCTACAACCTTGTTCAGAAATCATTTTTCCATGTTTTGGGACAACCAATGGCAATAGATGTTTCCTTGATTCTTCCAGTCGTTGGTGCTGATCTTGTTTTATCATTGCAAGCTTTGGCAAATACTCACAACTTAGCAACTAGGAATGCTAGATATTGA 1776 41.84 LRNNCSNQSLQRSNDNKQGVERHSRAEMGSLGEKTILEFEDESLVSPVSLNRKNFSIEGSIHSSTLGGGSQKLSYSNMKNRVFGSIKIVVFSAKINLLMPFGPLAIIVSTLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALRRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGVVVSKREQVFSKAAATVNSGLLLMAVMGLLFPAVLRSTHTELHSGKSELALSRFSSGIMLVAYAAYLVFQLKSDKNLYLPVDEGDNEGSSSDDEETPEITMWESIIWLSILTIWISVLSEYLVNAIEGASVAMNIPVAFISVILLPIVGNAAEHAGAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWIMGCPMDLNFQLFETATLFITVIVVAFMLQDGTSNYLKGLMLILCYLIVAASFFVHIDPASVGKLSLPLLQLGICKQNGSYSMPYKTNSRTMKIKTFTQETRPENLVYERQGTTQRSESACTSTLLKMGLTEARGSLHCCIVLNSGYNLVQKSFFHVLGQPMAIDVSLILPVVGADLVLSLQALANTHNLATRNARY 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24132864 24138035 + CePI673135_02g011100.1 Cec02g1110 196163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1110 591 FunFam Vacuolar cation/proton exchanger 293 449 - -
Cec02g1110 591 FunFam Vacuolar cation/proton exchanger 146 285 - -
Cec02g1110 591 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 56 453 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
Cec02g1110 591 MobiDBLite consensus disorder prediction 1 15 - -
Cec02g1110 591 NCBIfam calcium/proton exchanger 99 448 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Cec02g1110 591 Gene3D - 290 449 IPR044880 -
Cec02g1110 591 Gene3D - 145 285 IPR044880 -
Cec02g1110 591 MobiDBLite consensus disorder prediction 1 23 - -
Cec02g1110 591 Pfam Sodium/calcium exchanger protein 305 447 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec02g1110 591 Pfam Sodium/calcium exchanger protein 116 272 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1110 Cec-Chr2:24132864 Cec10g0414 Cec-Chr10:4972194 5.90E-158 dispersed
Cec02g1110 Cec-Chr2:24132864 Cec04g0836 Cec-Chr4:28101446 5.10E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1110 K07300 - csv:101215915 825.083