Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1120 ATGGCATTTGACAGAGAACCAAACACAACAAACTCTCCTGGAAATGAATCAAAAGAAGACAGAAAAAGCTGGCAATCTTCTTCCAAACGGGCAATATCTACAGAAGCAAACATAGCAGAAAGGGCGGCGGAGTGGGGACTGGTGGTGGAGACAAACGTGGAAGAAGGCAGTTTCAAGGCCATCGTGGGGAGAGCATCAGGTGAAGGAGGGGGCAGCAAAAGATCATCAGAGAAAATCAGTGGCACAGGAAGAACTTCAAGCTTTGGCAAGGAAACCTCTGGAGTTTTCCCAAGGGTATCACAAGAGTTGAAGGACGCTCTGGCTTCTTTAGAACAGACATTTGTAGTCTCTGATGCCACCAAACCAGACTGCCCCATCATGTATGCGAGCAGTGGCTTCTTTGGCATGACTGGTTATGCTTCAGAGGAAGTCATTGGAAGGAACTGCCGTTTTCTTCAGGGACCAGAGACGGACCAGAAAGAAGTTGACAAAATCCGATATGCAGTGAAAAACGGCAAAAGCTACTGCGGGAGGCTTTTGAACTACAAGAAGAATGGCACTCCTTTCTGGAATCTTCTGACAGTCACACCTATCAAGGATGACAATGGCAATACTATCAAATTTATTGGAATGCAGGTAGAAGTAAGCAAATACACAGAAGGCATAAATGATAAAGCATTACGACCGAATGGGTTGCCAAAGTCATTAATCCGCTATGATGCTCGCCAGAAGGAAAAGGCAATGGATTCCATCACAGAGGTCGTTCAGACTGTGAAGAATCCTCGATCTCATAATCGAGCTATGAGTCATGACACTACCAGAAAAAAAGAAGATTTGGAAACATTCAATCTTGACTATGTTCTTCCAAAGTCGGTTGAAGCTGCAAATGATACACCGGGTAGACAAACTCCTCAACAGGACCTCAAAGATGATGGGTTAGGCAAGAAGCCTAGGTTATCAAGTCGAGTTTCTCTAATGGGTTTCAAAGGGAAATCTCTAAGCAGTTCAAGGAAGCTTGAAGTAACAGCCTTTGAACCAGAAATTTTGATGTCCGACGAAGTAGAACGGACTGATAGTTGGGACCGTGCTGAAAGAGAAAAGGATATTCGCCAAGGAATTGATTTAGCTACCACATTGGAGAGAATTGAGAAAAATTTTGTCATTACTGATCCAAGGCTTCCTGATAATCCAATTATATTTGCATCCGACAGCTTTCTTGAATTGACGGAATATACTCGTGAGGAAATTTTGGGACGAAACTGTCGGTTTCTTCAAGGACCTGAAACAGATCAAGAAACTGTCTCAAAGATAAGGGATGCAATTAGGGAACAAAGAGAAATAACTGTTCAGTTGATCAACTATACCAAGACTGGTAAAAAGTTCTGGAATTTATTCCACTTGCAACCAATGCGTGATGAAACGGGAGAGCTTCAATATTTTATTGGTGTACAACTAGATGGAAGTGGTCACGTGGAACCTTTGCAAAACCGCCTTTCTGAGAACGCAGAGCTGCAAAGTGCCAAGCTGGTTAAAGCCACTGCAGAGAATGTTGATGAGGCTGTTCGTGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCACTTCATTCTCAACCAGTCTTCCCAAGGCCTCACAAGAAGCACAATTCTTCTTGGAGTGCTATACAGAAGATTATCCGACGTGGTGAAAAAATTGGACTCCAACATTTTAAGCCAATTAAACCACTGGGTTGTGGAGACACTGGCAGTGTTCATCTGGTGGAACTTCTAGGTACAAGTGAACTTTATGCCTTGAAAGCAATGGAGAAATCAGCACTTTTGAATCGAAACAAGGTCCACAGAGCATGCATTGAAAGGCAAATCATTGCGCTTCTGGATCATCCTTTTCTTCCAACACTATACACTTCATTTGAGACCCCTACACACGTTTGTTTGATAACAGACTTCTGCCCTGGTGGGGAGTTATTCGCATTGCTTGATAAGCAACCAATGAAAATGTTTAAAGAGGATTCTGCAAGGTTCTATGCTGCAGAGGTCATCATTGGCTTGGAATATCTTCACTGTCTAGGAATCATTTACCGGGATCTGAAGCCTGAAAATATTCTTCTCCAGAAGGATGGGCATGTTACGCTTGCTGACTTCGATTTATCACTTGTAACATCCTGCAAACCGCAGATTGTGAAGTATCCATTGCATCATGGTAGAAGGAGATCTCGAAGTCAACCACCACCAGTATTTGTTGCAGAGCCGATCACGCAATCAAATTCTTTTGTTGGAACCGAAGAGTATATTGCTCCTGAAATTATAACAGGGGAAGGCCACAGCAGCTCTATCGATTGGTGGGCTCTTGGTATATTGTTATATGAGATGCTTTATGGTCGCACGCCTTTCAGAGGAAAGAACAGGCAGAAGACTTTTGGTAACATCTTGCACAAAGATCTCACTTTCCCGAGTAGCATTCAGGTGAGTCTTGCAGCAAGGCAGCTGATCAATGCATTGCTACAAAGAGACCCCGCCAGACGTTTGGGATCAAGTACAGGTGCAAATGAAATCAAACAGCACCCCTTTTTCCAATCAATCAACTGGCCACTGATCCGGTGTATGGTCCCGCCACCATTAGAATCACCTCTTCACCTAACTGGAAAAGATGGAACCAAGAACATAAACTGGGAAGATGATGGTGTGCTTAGCTCAATGGATATGGATTTCTTCTGA 2721 43.51 MAFDREPNTTNSPGNESKEDRKSWQSSSKRAISTEANIAERAAEWGLVVETNVEEGSFKAIVGRASGEGGGSKRSSEKISGTGRTSSFGKETSGVFPRVSQELKDALASLEQTFVVSDATKPDCPIMYASSGFFGMTGYASEEVIGRNCRFLQGPETDQKEVDKIRYAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIKDDNGNTIKFIGMQVEVSKYTEGINDKALRPNGLPKSLIRYDARQKEKAMDSITEVVQTVKNPRSHNRAMSHDTTRKKEDLETFNLDYVLPKSVEAANDTPGRQTPQQDLKDDGLGKKPRLSSRVSLMGFKGKSLSSSRKLEVTAFEPEILMSDEVERTDSWDRAEREKDIRQGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQETVSKIRDAIREQREITVQLINYTKTGKKFWNLFHLQPMRDETGELQYFIGVQLDGSGHVEPLQNRLSENAELQSAKLVKATAENVDEAVRELPDANLRPEDLWALHSQPVFPRPHKKHNSSWSAIQKIIRRGEKIGLQHFKPIKPLGCGDTGSVHLVELLGTSELYALKAMEKSALLNRNKVHRACIERQIIALLDHPFLPTLYTSFETPTHVCLITDFCPGGELFALLDKQPMKMFKEDSARFYAAEVIIGLEYLHCLGIIYRDLKPENILLQKDGHVTLADFDLSLVTSCKPQIVKYPLHHGRRRSRSQPPPVFVAEPITQSNSFVGTEEYIAPEIITGEGHSSSIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIQVSLAARQLINALLQRDPARRLGSSTGANEIKQHPFFQSINWPLIRCMVPPPLESPLHLTGKDGTKNINWEDDGVLSSMDMDFF 906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24727069 24740717 - CePI673135_02g011200.1 Cec02g1120 196173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1120 906 ProSiteProfiles Protein kinase domain profile. 572 859 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1120 906 PANTHER FLIPPASE KINASE 1-RELATED 523 878 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec02g1120 906 ProSiteProfiles PAC domain profile. 445 499 IPR000700 -
Cec02g1120 906 MobiDBLite consensus disorder prediction 292 318 - -
Cec02g1120 906 Gene3D PAS domain 360 524 - -
Cec02g1120 906 FunFam LOV domain-containing protein 360 524 - -
Cec02g1120 906 MobiDBLite consensus disorder prediction 1 31 - -
Cec02g1120 906 CDD PAS 386 486 IPR000014 -
Cec02g1120 906 Gene3D Transferase(Phosphotransferase) domain 1 656 876 - -
Cec02g1120 906 Pfam Protein kinase domain 575 859 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1120 906 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 212 IPR035965 -
Cec02g1120 906 ProSiteProfiles PAS repeat profile. 371 444 IPR000014 -
Cec02g1120 906 Gene3D PAS domain 113 284 - -
Cec02g1120 906 ProSiteProfiles PAS repeat profile. 99 172 IPR000014 -
Cec02g1120 906 SMART serkin_6 572 859 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g1120 906 SMART pac_2 448 490 IPR001610 -
Cec02g1120 906 SMART pac_2 176 218 IPR001610 -
Cec02g1120 906 ProSitePatterns Protein kinases ATP-binding region signature. 578 601 IPR017441 GO:0005524(InterPro)
Cec02g1120 906 SUPERFAMILY Protein kinase-like (PK-like) 549 880 IPR011009 -
Cec02g1120 906 CDD PAS 126 215 IPR000014 -
Cec02g1120 906 MobiDBLite consensus disorder prediction 73 93 - -
Cec02g1120 906 NCBIfam PAS domain S-box protein 396 486 IPR000014 -
Cec02g1120 906 NCBIfam PAS domain S-box protein 126 216 IPR000014 -
Cec02g1120 906 Gene3D Phosphorylase Kinase; domain 1 571 655 - -
Cec02g1120 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g1120 906 FunFam Putative LOV domain-containing protein 113 269 - -
Cec02g1120 906 Pfam PAS domain 120 216 IPR000014 -
Cec02g1120 906 Pfam PAS domain 394 486 IPR000014 -
Cec02g1120 906 FunFam Putative LOV domain-containing protein 656 871 - -
Cec02g1120 906 CDD STKc_phototropin_like 570 878 - -
Cec02g1120 906 FunFam LOV domain-containing protein 571 655 - -
Cec02g1120 906 SMART pas_2 373 442 IPR000014 -
Cec02g1120 906 SMART pas_2 101 170 IPR000014 -
Cec02g1120 906 MobiDBLite consensus disorder prediction 63 93 - -
Cec02g1120 906 ProSiteProfiles PAC domain profile. 173 227 IPR000700 -
Cec02g1120 906 SUPERFAMILY PYP-like sensor domain (PAS domain) 387 486 IPR035965 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1120 Cec-Chr2:24727069 Cec10g1395 Cec-Chr10:28259783 2.50E-99 dispersed
Cec02g2182 Cec-Chr2:39231636 Cec02g1120 Cec-Chr2:24727069 9.5e-314 transposed
Cec05g2368 Cec-Chr5:34968503 Cec02g1120 Cec-Chr2:24727069 9.30E-48 transposed
Cec11g0977 Cec-Chr11:16173631 Cec02g1120 Cec-Chr2:24727069 4.60E-34 wgd
Cec02g0325 Cec-Chr2:2987582 Cec02g1120 Cec-Chr2:24727069 3.20E-270 wgd
Cec02g1120 Cec-Chr2:24727069 Cec03g0935 Cec-Chr3:12622756 1.90E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71738 PF00069 Pkinase 1.30E-61 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1120 K20715 - csv:101215355 1708.35