Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1137 ATGGCAGAGTGTGGCAGAAGAGACAGAAAGGTAACCGGGGTTAGAGAACGTGGGTTAGTCTCCTTCAGAACCGGAGAGGTAGGTTTGGGGTTTGTCGAGCTCCAGAACTTTACAGGAAGAAGGAAGCTGCCTGTGTCTCTCTGTATAAAACCATCAACAAAGACCCTCTTCCAACCCTCTCTGATTCTGATCAGATATCAAGAAAAAGATCAAACTGCACAACCGTTTGAACTCAGAAGTCAGAACTGTGACTACTTTCACATTCTACTGATCTTTTTTGATTCATCTAAGCTGATCCCAGTTCCAAAGACTTGTTTTGTACCTGAAATTTTGATCAGAATGGGTCTCTCCAGCCTTCCTGCCCCTTCTGAAGGAGTACTGGGTGTCATCCTTGTAAATACAGCCTTATCAATTTCTATCTTCAAAGGGATAGTTCGGTCAATTCTCCACGTTGTTGGCATCCATCCCTCGTCGTCGCCTACATTACCATCTTCACCAGATTCCATGGAGAATGCTCCTGAATCCATAGAATTCCATCTTAACCCAAATGGAAGTTACATTGAAGAGTTCCACAGCCGAATTCCAGCAATTCTGTTCAACAAAGTTCATAGCTGCAAATGGCTCGAACACGACTGCTCGGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTCTTCCACAGAGTGTGCTTGGAGAAGTGGTTGGACTACTGGAACCTTACATGTCCACTTTGTCGAACGCCACTAGTGCCCGAAGAAGACACAGCTTCCTGCTTTTGGCCGTAG 810 45.19 MAECGRRDRKVTGVRERGLVSFRTGEVGLGFVELQNFTGRRKLPVSLCIKPSTKTLFQPSLILIRYQEKDQTAQPFELRSQNCDYFHILLIFFDSSKLIPVPKTCFVPEILIRMGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHPSSSPTLPSSPDSMENAPESIEFHLNPNGSYIEEFHSRIPAILFNKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCFWP 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25855420 25857272 - CePI673135_02g011370.1 Cec02g1137 196190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1137 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 259 IPR013083 -
Cec02g1137 269 PANTHER - 114 268 IPR044249 -
Cec02g1137 269 SUPERFAMILY RING/U-box 200 260 - -
Cec02g1137 269 Pfam Ring finger domain 211 254 IPR001841 -
Cec02g1137 269 SMART ring_2 212 253 IPR001841 -
Cec02g1137 269 ProSiteProfiles Zinc finger RING-type profile. 212 254 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0315 Cec-Chr2:2877925 Cec02g1137 Cec-Chr2:25855420 1.50E-19 dispersed
Cec02g1137 Cec-Chr2:25855420 Cec03g0150 Cec-Chr3:1456283 8.20E-06 dispersed
Cec02g1137 Cec-Chr2:25855420 Cec06g0358 Cec-Chr6:4119039 2.60E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1137 K16285 - csv:101216645 315.464