Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g1137 | ATGGCAGAGTGTGGCAGAAGAGACAGAAAGGTAACCGGGGTTAGAGAACGTGGGTTAGTCTCCTTCAGAACCGGAGAGGTAGGTTTGGGGTTTGTCGAGCTCCAGAACTTTACAGGAAGAAGGAAGCTGCCTGTGTCTCTCTGTATAAAACCATCAACAAAGACCCTCTTCCAACCCTCTCTGATTCTGATCAGATATCAAGAAAAAGATCAAACTGCACAACCGTTTGAACTCAGAAGTCAGAACTGTGACTACTTTCACATTCTACTGATCTTTTTTGATTCATCTAAGCTGATCCCAGTTCCAAAGACTTGTTTTGTACCTGAAATTTTGATCAGAATGGGTCTCTCCAGCCTTCCTGCCCCTTCTGAAGGAGTACTGGGTGTCATCCTTGTAAATACAGCCTTATCAATTTCTATCTTCAAAGGGATAGTTCGGTCAATTCTCCACGTTGTTGGCATCCATCCCTCGTCGTCGCCTACATTACCATCTTCACCAGATTCCATGGAGAATGCTCCTGAATCCATAGAATTCCATCTTAACCCAAATGGAAGTTACATTGAAGAGTTCCACAGCCGAATTCCAGCAATTCTGTTCAACAAAGTTCATAGCTGCAAATGGCTCGAACACGACTGCTCGGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTCTTCCACAGAGTGTGCTTGGAGAAGTGGTTGGACTACTGGAACCTTACATGTCCACTTTGTCGAACGCCACTAGTGCCCGAAGAAGACACAGCTTCCTGCTTTTGGCCGTAG | 810 | 45.19 | MAECGRRDRKVTGVRERGLVSFRTGEVGLGFVELQNFTGRRKLPVSLCIKPSTKTLFQPSLILIRYQEKDQTAQPFELRSQNCDYFHILLIFFDSSKLIPVPKTCFVPEILIRMGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHPSSSPTLPSSPDSMENAPESIEFHLNPNGSYIEEFHSRIPAILFNKVHSCKWLEHDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLVPEEDTASCFWP | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 25855420 | 25857272 | - | CePI673135_02g011370.1 | Cec02g1137 | 196190 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g1137 | 269 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 179 | 259 | IPR013083 | - | |
Cec02g1137 | 269 | PANTHER | - | 114 | 268 | IPR044249 | - | |
Cec02g1137 | 269 | SUPERFAMILY | RING/U-box | 200 | 260 | - | - | |
Cec02g1137 | 269 | Pfam | Ring finger domain | 211 | 254 | IPR001841 | - | |
Cec02g1137 | 269 | SMART | ring_2 | 212 | 253 | IPR001841 | - | |
Cec02g1137 | 269 | ProSiteProfiles | Zinc finger RING-type profile. | 212 | 254 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0315 | Cec-Chr2:2877925 | Cec02g1137 | Cec-Chr2:25855420 | 1.50E-19 | dispersed | |
Cec02g1137 | Cec-Chr2:25855420 | Cec03g0150 | Cec-Chr3:1456283 | 8.20E-06 | dispersed | |
Cec02g1137 | Cec-Chr2:25855420 | Cec06g0358 | Cec-Chr6:4119039 | 2.60E-12 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g1137 | K16285 | - | csv:101216645 | 315.464 |