Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1222 ATGGCGGCAACTGTCTCACCGTGGGGCAAGCCCGGAGCTTGGGCTTTGGATGCGGAGGAGCACGAGGCGGAGCTTCTCAAGGACCAGCAGGACCAGTCTCGCCAGCAATCGGAGCCCAGTGCCGACTTTCCATCCCTCGCCACCGCGGCCGCCACCAAACCTAAGAAGAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGACCTATGGCGGTCCAAAGCCGTCCTCTCAATCCAGTGATCCAAAGGGTCTGACGGCTGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACGGCGGAGGAGATGGACCGCAACCGTCTTGGTGGAGGCTTCAAGAGTTGGGGTCAGAATAGTTTGTACGACAGGGGGAATCGGTATTCTAACGCGGAAGATTCACCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAGTCAAGGAGGAGCAATGATGGATCTGATAGAGAATTCAGAAGGGAATCGTTGCCTTCTAGGGCTGATGAGATTGATGATTGGGGAGCCGGGAAGAAGCCTATGATGGGTAATGGGATTGAGAGGAGAGAGAGAGGAGGAGGAGGTTTTTTCGATTCGCACTCGTCGAAAGCCGACGAATCGGATAGTTGGGTATCGAGTAAGAGCTTTACACCTTCTGAAGGTCGGAGATCAGGCGGTATGGGTGGTGGTTTTGACAGAGAGCGAAGAGGAGGATTTCCCTCGAGCGGTGGTGGCGCCGATTCAGACAGTTGGGGCAGAAAATCTGAAGGGGCTAGAGGTGGAATTGGTGAGAACGGTGGTGGGGCAGATTCGGAAAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCAATCCCTTTGAACAATGGGAATCAGGAGGCTTCTGGTGCTGCAGCAAAGCCAAAGGGTTCCAATCCTTTTGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAAGACTGGAAGAAGATTGATGAGCAACTCGAATCAATGAAAATTAAGGATACGGTGGAGAGAACCGAGAAATCTAGTGGGGCTTCGTTTGAGAGAAAAGGCTTTGGAGTTAGAAGTGGTCGGTCTCCCGAAGATCGGTCAGTAAGGAGTTGGAGGAAGCCAGAGTCTGTGGAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGACCTGCTGAGGATTGA 1227 52.73 MAATVSPWGKPGAWALDAEEHEAELLKDQQDQSRQQSEPSADFPSLATAAATKPKKKKGQSIPLSEFQTYGGPKPSSQSSDPKGLTAEDLMMLPTGPRQRTAEEMDRNRLGGGFKSWGQNSLYDRGNRYSNAEDSPNSRRGSRVFDESRRSNDGSDREFRRESLPSRADEIDDWGAGKKPMMGNGIERRERGGGGFFDSHSSKADESDSWVSSKSFTPSEGRRSGGMGGGFDRERRGGFPSSGGGADSDSWGRKSEGARGGIGENGGGADSENWGKKSEGVRGGIGERPRLNLQPRSIPLNNGNQEASGAAAKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESMKIKDTVERTEKSSGASFERKGFGVRSGRSPEDRSVRSWRKPESVESRPQSAEVVEDGPAED 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28567979 28569893 + CePI673135_02g012220.1 Cec02g1222 196275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1222 408 Pfam Plant specific eukaryotic initiation factor 4B 7 361 IPR010433 GO:0003743(InterPro)
Cec02g1222 408 MobiDBLite consensus disorder prediction 15 31 - -
Cec02g1222 408 MobiDBLite consensus disorder prediction 183 207 - -
Cec02g1222 408 Coils Coil 16 36 - -
Cec02g1222 408 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 397 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
Cec02g1222 408 MobiDBLite consensus disorder prediction 62 84 - -
Cec02g1222 408 MobiDBLite consensus disorder prediction 371 393 - -
Cec02g1222 408 MobiDBLite consensus disorder prediction 329 362 - -
Cec02g1222 408 MobiDBLite consensus disorder prediction 120 138 - -
Cec02g1222 408 MobiDBLite consensus disorder prediction 1 408 - -
Cec02g1222 408 MobiDBLite consensus disorder prediction 139 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1222 Cec-Chr2:28567979 Cec08g1823 Cec-Chr8:29178134 5.80E-27 dispersed
Cec02g0450 Cec-Chr2:4245441 Cec02g1222 Cec-Chr2:28567979 7.10E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1222 K03258 - csv:101214573 684.485