Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1224 ATGAAGGAACTTCAACGGCCTCTACCGGCGTTAATCTCGCTATTGATCGTCGTCAGCAGCGGCGCAATAAGCCAAATCAATGGACAGGATTTCACGATTGAAGAAGCAACAATCGAGGAAATCCAGAGAGCTTTTGCCGACGAAAGGCTCACATCGAGAATACTAGTGGATTTCTACTTGAAACAAATCGAAGCCCTAAATCCGATGCTTAGGAGCGTGGTGGAGGTGAATCCGGAGGCGAGGGTTGAGGCGGACGAGGCGGACCGACGGCGGAGAGAGGCGAATGAGAACCGGTTGCCGGTCGGAGGCCTCGACGGCGTCCCGGTGCTGTTGAAGGACACTATTGCGACGAAGGACAAGATGAACACGACGGCTGGATCCTACGCATTGGTCGGATCGGTGGTGCCTCGGGACGCCGGCGTCGTCGAGAGGCTGAGAAAAGCTGGGGCGGTGATTTTGGGGAAAGCGAGTCTCAGCGAGTGGTACTCGTTCCGGGCTTTGGGTCACGTGCCCAATGGATGGTGCGCACGTGCCGGTCAAGGAGTGAATCCTTATGTGGCATCTGGTGGGACTTGTGGGTCAAGTAGTGGCTCTGCCATTTGTGTTGCTGCTAACATGGTGACCGTCTCACTCGGCACTGAAACTCATGGCTCCATCTTCTGCCCCTCCGATCACAACTCCGTTGTTGGATTCAAACCCACTGTCGGCCTCACTACCCGAGCAGGAGTCATTCCCATCATGTCTCGCCACGACACCGTCGGGCCTATAGCCAGGACAGTGTCGGATGCAGTTTATGTGCTTGATGCGATTGTTGGTTTTGATCCGAGAGATGCTGAGGCCACAAGCCAAGCCTCCAAATTTATACCTCAAGAATCATCTTCATACCTTAAGCTGTTGCTAAATGATTACTTGAAAGAGCTCATCACTTCTCCAGTCAGATCACTTGCAGATGTTATTGCCTTCAACAATAAGCATCCTCAATTGGAGAAACTCAAAGAATATGGACAAGCCACTTTCATTCAATCAGAGAAAACAGATGGGTTTGGGGAGAAAGAAAAGAAGGCAATGGAAACAATGGCGAATTTATCGCGAAACGGATTCGAGAAGTTAATGAGAGAAAATGAGTTGGACGCGATCATTACACCGGGATCCGGCTGCGTTTCGGTGCTGGCGATCGGAGGATACCCTGGAATTACTGTGCCTGCAGGATATGGTAAAGACGATGGTATGCCATTTGGGATCTGTTTTGGAGGGTTGAAAGGCACAGAGCCAAAGCTGATTGAGATTGCTTATGCTTTTGAGCAAGCCACTATGATGCGAAGGCCTCCATTTTCAAATTCAATGGCGGAATCAAATGGTTGGAAGATTGTCATTGCAATTAGAGTCCAAATAGAGCTCAAAGGGATCATAGAAGTGAATCCAGATGCTTTAGACCAAGCCTCTCAAGCCGATCTTGAGCGCAAGAGAAATTTGCCGAGCTCTTCGTCTCCACTGCATGGCATTCCTGTACTTCTAAAAGATAACATTGCAACCAGGGATAAGCTCAACACAACGGCTGGCTTTGCTCTGCTTGGCTCTGTTGTTCCTCGTGATGCAGGGGTGGTGACCAAGTTGAGGAAGGCAGGTGCAATTATCTTTGGGAAAGCGAGCCTGAGCGAGTGGTCTGATTTCAGGTCCTATGAACCCCCCAATGGTTGGAGCGCCAGGGGTGGCCAAGGGAAGAATCCTTACACATTGGGAGAACCATGTGGCTCGAGTAGCGGCTCTGCCATATCCGTTGCAGCAAATATGGTTGCAGTTTCACTGGGAACCGAAACTGATGGATCAATATTATGCCCTTCAACTTTCAATTCAGTAGTTGGCATTAAACCCACAGTAGGTCTCACCAGTCGAGCAGGGGTCGTTCCGATTTCTTTGAGGCAGGACACTGTCGGGCCTATTTGTAGAACAGTATCAGATGCTGCTTATGTTCTAGATGCCATTGTAGGAGCGGACAGATATGATAATTCAACAATCGAAGCATCAAAGTACATTCCAAAAGATGGATATGGCCAATTTCTAAGGGTTGATAGGCTGAAAGGAAAAAGAATAGGAATCGTGAGGGAATTCTTTGATTTTGGTCATGATGATGCCTTCTACCCTGGAGCTTTTGAGAAAGAAAAGCTAAAGGAGTACGGTCAGGAGTTATTTCTAAAAGCAGAAGCTACAAAAGGAATCGGAGTTGCAGAAAAGGCAGCATTAACCAGATTAGCAACACTGTCAAAAAACGGATTTGAGCAAGTAATGATTAAGAAAAAGCTTGATGCAATAGCGGCTCCTGGTTGGGCAATCTCTCCTATTCTTGCAATTGGAGGTTTTCCTGGAGTTAGTGTACCAGCTGGATATAACCCTCAAGGGGTTCCCTATGGCATCGGCTTTGGAGGATGGAGAAATGAAAAAGAAGATGGAAATTACCAGGCTACCGATCAGGATCCTTGTCCTCTTCCTCGCCGCCATATCAGCGCGTTCCGAGTACTACTCCATAACTGCTCCGAGGGTTCAGTTAAAGGAGAAGGTAACCAATCTTCCTTTCTTTTCAAAATCCTGAGCTGCAAAAAACCCAGCGCCGTCGAAATGGCGCACTCAAACGTCACCATCACCATAGACAACCTATCGGCGGTTTCTACGCCGTCAAGCCCCTCCGGGAGGGACCCGACCCGAAATCGAAAGTCAGGTCGCTCAAGAAAAGTTAGAGCTTATCTTGGGATGAAATTCGGAACTTACCGAAGTGAGGGATGCAATAAGAAAATATTCAATGCGAGGTGGATATGA 2811 48.45 MKELQRPLPALISLLIVVSSGAISQINGQDFTIEEATIEEIQRAFADERLTSRILVDFYLKQIEALNPMLRSVVEVNPEARVEADEADRRRREANENRLPVGGLDGVPVLLKDTIATKDKMNTTAGSYALVGSVVPRDAGVVERLRKAGAVILGKASLSEWYSFRALGHVPNGWCARAGQGVNPYVASGGTCGSSSGSAICVAANMVTVSLGTETHGSIFCPSDHNSVVGFKPTVGLTTRAGVIPIMSRHDTVGPIARTVSDAVYVLDAIVGFDPRDAEATSQASKFIPQESSSYLKLLLNDYLKELITSPVRSLADVIAFNNKHPQLEKLKEYGQATFIQSEKTDGFGEKEKKAMETMANLSRNGFEKLMRENELDAIITPGSGCVSVLAIGGYPGITVPAGYGKDDGMPFGICFGGLKGTEPKLIEIAYAFEQATMMRRPPFSNSMAESNGWKIVIAIRVQIELKGIIEVNPDALDQASQADLERKRNLPSSSSPLHGIPVLLKDNIATRDKLNTTAGFALLGSVVPRDAGVVTKLRKAGAIIFGKASLSEWSDFRSYEPPNGWSARGGQGKNPYTLGEPCGSSSGSAISVAANMVAVSLGTETDGSILCPSTFNSVVGIKPTVGLTSRAGVVPISLRQDTVGPICRTVSDAAYVLDAIVGADRYDNSTIEASKYIPKDGYGQFLRVDRLKGKRIGIVREFFDFGHDDAFYPGAFEKEKLKEYGQELFLKAEATKGIGVAEKAALTRLATLSKNGFEQVMIKKKLDAIAAPGWAISPILAIGGFPGVSVPAGYNPQGVPYGIGFGGWRNEKEDGNYQATDQDPCPLPRRHISAFRVLLHNCSEGSVKGEGNQSSFLFKILSCKKPSAVEMAHSNVTITIDNLSAVSTPSSPSGRDPTRNRKSGRSRKVRAYLGMKFGTYRSEGCNKKIFNARWI 936
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28582039 28598130 + CePI673135_02g012240.1 Cec02g1224 196277

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1224 936 PANTHER AMIDASE 12 297 - -
Cec02g1224 936 MobiDBLite consensus disorder prediction 885 908 - -
Cec02g1224 936 Coils Coil 77 97 - -
Cec02g1224 936 SUPERFAMILY Amidase signature (AS) enzymes 463 810 IPR036928 -
Cec02g1224 936 SUPERFAMILY Amidase signature (AS) enzymes 33 443 IPR036928 -
Cec02g1224 936 Pfam Amidase 467 711 IPR023631 -
Cec02g1224 936 Pfam Amidase 55 289 IPR023631 -
Cec02g1224 936 Gene3D Amidase signature (AS) domain 296 444 IPR036928 -
Cec02g1224 936 Gene3D Amidase signature (AS) domain 716 815 IPR036928 -
Cec02g1224 936 Gene3D Amidase signature (AS) domain 457 715 IPR036928 -
Cec02g1224 936 Gene3D Amidase signature (AS) domain 18 295 IPR036928 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1224 K01426 - - csv:101205119 473.396
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0449 Cec-Chr2:4238601 Cec02g1224 Cec-Chr2:28582039 2.60E-144 dispersed
Cec02g1224 Cec-Chr2:28582039 Cec03g1749 Cec-Chr3:35817094 1.00E-10 dispersed
Cec02g1224 Cec-Chr2:28582039 Cec02g1226 Cec-Chr2:28608052 1.30E-98 proximal
Cec09g1676 Cec-Chr9:31004951 Cec02g1224 Cec-Chr2:28582039 1.50E-10 transposed
Cec09g1773 Cec-Chr9:33374392 Cec02g1224 Cec-Chr2:28582039 2.40E-13 transposed
Cec02g0448 Cec-Chr2:4233986 Cec02g1224 Cec-Chr2:28582039 2.60E-125 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g123 . . . . . . . . Cmo19g00736 Cmo11g01729 . . . . . . Cpe15g00582 . . . . . . . . . . . . . . Cone12ag1217 Cone8ag1270 . . . Csa07g00085 Chy11g00286 . Blo04g00557 . . . . . Bma03g00597 . . . . . . . Car19g00556 . . Bhi10g01881 Tan05g1178 . . Hepe08g0269 . . Cla02g01140 Cam02g1217 Cec02g1224 Cco02g1270 Clacu02g1199 Cmu02g1168 Cre02g1475 . Csa02g01363 . Cme11g00409
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000457 1 5 3 2 1 4 2 4 4 5 3 4 2 5 6 2 4 6 1 5 5 5 4 5 4 1 5 4 8 7 117