Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1240 ATGGGTTCTTTGAAGCCGCCGCCTTCGACGACGGTGCTGAAATGGCTGGGGTTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGAAACAACTACACTTTTTCCAACTACTCCGACTCCCTCAAATCTCTGATGAATCTAACCCAACTTCAGCTCAATAATCTCTCCGTCGCTAAAGACGTCGGAAAAGCCTTCGGACTTCTCGCCGGAATCGCCTGTGACCGGTTTCCCACATGGGTAATCTTACTTATTGGATCTCTTGAAGGTCTTCTTGGCTATGGCGCTCAGTGGCTTGTCGTTAGCCAAAGGATTTCTCCTCTTCCTTATTGGCAGATGTGCATCTTCTTGTGTTTGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGCTAGTAACTTGCATCAGAAACTTCCGGAAGAATCGCGGCCCAGTTTCCGGCATTCTCAAAGGCTACGTCGGCCTCAGCACCGCCATTTTCACCGATCTCTGTACCGCTCTGTTTTCCTCCGACCCATCTTCTTTCCTCCTCATGCTCGCCTTTGTCCCCTTCGCCGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCAACCACCGCCGCCGATACCCAACAAGAATCCAATTACTTCTCCGTCTTCAACGCTCTCGCCGTCGTCGTCGCCGTCTATCTCTTATGCTTCGATTTCATCAAAAACTCCGGCAGGCTCTTCTCCCAAATATTCTCCATCGGGCTACTGATTCTCCTCGGATCCCCTTTGATCATCCCAATTTACACGTTTTTCAAGAGTTGGCACTCGAATCGAGCCGGATCGGATCTGGAAGCTCGAATTGAGGAGCCGCTACTGAAAGAAGAGGCAGTTGCGGCGCCGGTAAAGGAGGAAGCAGAGGAAATTGCAGAGGTAGAGCAGAGAGCGCCGGTGATCGGAGAAGAACACACGATTTTTGAAGCGGTGAGAACAATTGATTTCTGGGTGTTATTCGTGTCGTTTCTGTGTGGAGTTGGAACGGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTGGCTCTGGGTTACGCCGATGTTTCAGTGTTCGTTTCTCTCACAAGTATTTGGGGATTTTTCGGCCGGATTCTTTCCGGAACACTTTCCGAGCATTTTCTCAAAAAAGTAGGCACACCAAGACCTCTATGGAACGCTGCATCTCAAATTCTAATGACCGTTGGATATGTTTTGATGGCCATGGCAATGCCGGGTTCTCTCTACATCGGCTCGGTCATCGTCGGGATTTGCTACGGCGTTCGTCTCTCTGTCACTGTCCCCACCGCCTCTGAGCTCTTCGGTCTCAAATACTACGGTCTCATCTACAACATTCTCATCCTCAACCTCCCAATCGGATCCTTCCTCTTCTCCGGCCTCCTTGCAGGGTTTCTCTACGACATGGAAGCGACCCCGACCGAGGGCGGCGGGAACACGTGCATCGGAGGGCATTGCTACAGAATTGTGTTTGTTGTGATGGCGTTGGCTTGTGTAATTGGGTTTGTTTTGGACATTTGGTTGGCGTGTAGAACCAAAGAGCTTTATTCTAAGCTTAAAGCCAACAAGAAATCAAAGAAGGGAAACAACAATAACAACTCCTAG 1632 50.49 MGSLKPPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDSLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCLGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSSDPSSFLLMLAFVPFAVCLFAMFFLREIPPPTTAADTQQESNYFSVFNALAVVVAVYLLCFDFIKNSGRLFSQIFSIGLLILLGSPLIIPIYTFFKSWHSNRAGSDLEARIEEPLLKEEAVAAPVKEEAEEIAEVEQRAPVIGEEHTIFEAVRTIDFWVLFVSFLCGVGTGLAVMNNMGQIGLALGYADVSVFVSLTSIWGFFGRILSGTLSEHFLKKVGTPRPLWNAASQILMTVGYVLMAMAMPGSLYIGSVIVGICYGVRLSVTVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACVIGFVLDIWLACRTKELYSKLKANKKSKKGNNNNNS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28901523 28905625 - CePI673135_02g012400.1 Cec02g1240 196293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1240 543 Gene3D MFS general substrate transporter like domains 11 208 IPR036259 -
Cec02g1240 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 528 - GO:0016020(PANTHER)
Cec02g1240 543 SUPERFAMILY MFS general substrate transporter 11 522 IPR036259 -
Cec02g1240 543 CDD MFS_Mch1p_like 13 510 - -
Cec02g1240 543 Pfam Nodulin-like 14 260 IPR010658 -
Cec02g1240 543 Gene3D MFS general substrate transporter like domains 284 540 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1240 Cec-Chr2:28901523 Cec10g2008 Cec-Chr10:34857088 3.60E-85 dispersed
Cec03g0020 Cec-Chr3:247925 Cec02g1240 Cec-Chr2:28901523 4.20E-62 transposed
Cec06g0065 Cec-Chr6:617395 Cec02g1240 Cec-Chr2:28901523 1.90E-68 transposed
Cec07g1222 Cec-Chr7:27732197 Cec02g1240 Cec-Chr2:28901523 4.50E-70 transposed
Cec07g1352 Cec-Chr7:29142721 Cec02g1240 Cec-Chr2:28901523 4.10E-92 transposed
Cec11g0736 Cec-Chr11:8332973 Cec02g1240 Cec-Chr2:28901523 2.10E-86 transposed
Cec02g0442 Cec-Chr2:4186979 Cec02g1240 Cec-Chr2:28901523 9.40E-211 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1240 - - - 0.0