Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1251 ATGGAAACTCGGAGCAGAAAGCGGGCGGAGGCCTCCTCAGCAGCCCCTTCTTCTTCGTCTTCTGGTCCAACAACCCGTTCTACCAAGCGCGCACGTCTCTCTGGTACTTCTCCGTCGAATCTTGCTGCATCTACTCTTTCGATCACAACACGTTCTCGCTCTACCCGAACCCAAGAACCGTCTGCCACCAGTACTCCAATGGACTCGACTAATGAATCATCAGGGTCACGCCGACGCGGGAAGAATTCTGATAAAGAAAACTCGGATAAGGGGAAGGAGAAGGAACACGAGGATAGAATCGGGGATAGAGAAAGGAATGCTGAGCAGAGCTTTGGGCTAAATATTGAAGGTAGTGGCGGTGGGGAGGATGATGATAACGACAGTGAAGGAGGAATGGGAGTCTTGCAGCAGAATTTATCCACAGCGAGTAGCGCCCTTCAAGGACTTCTCAGGAAACTCGGTGCTGGACTGGATGATTTACTTCCATCTTCTGCAATTGCATCGGCTTCATCCTCACAGCAGAGAGGACGGCTTAAGAAGATCTTATCTGGGTTGAGAGCGGATGGAGAAGAAGGGAGGCAGGTTGAGGCATTGACACAGCTCTGTGAGATGCTCTCGATCGGAACTGAGGAGTCTCTAAGTACTTTCTCTGTTGATTCCTTCGTCCCTGTCCTTGTCGGGTTACTTAATCACGAAAGCAATCCTGATATAATGCTTCTAGCGGCTAGGGCACTAACCCATCTGTGCGATGTCCTCCCTTCATCATGTGCTGCTGTCGTGCATTATGGTGCTGTCTCCTGCTTCTGTGCGAGATTGCTGACTATAGAATACATGGACCTAGCTGAACAGTCCCTGCAAGCTTTAAAGAAGATATCCCAGGAACACCCTACTGCTTGCCTGCGGGCTGGTGCTCTTATGGCCGTGCTTTCATATTTAGATTTCTTCTCTACAGGAGTTCAGCGAGTCGCATTGTCCACTGCTGCTAATATGTGCAAGAAGCTTCCTTCGGATGCAGCTGACTTTGTGATGGAAGCTGTTCCCCTGCTGACAAACCTTCTTCAGTATCATGATGCAAAAGTGTTGGAGCATGCTTCAGTTTGTTTGACTCGTATTGCGGAGGCCTTTGCCTCATCTCCGGATAAATTAGATGAACTATGTAACCATGGACTTGTTACACAAGCTGCCTCACTTATTTCCACCAGCAGTACTGGAGGTGGACAGTCAACTCTTGGCTCAGCTACTTACACAGGATTAATCCGACTTCTTTCCACATGTGCAAGTGGATCTGCCTTAGGTGCAAAAACTTTGCTGCTTCTTGGGATCAGTGGGATTCTTAAAGATATATTATCTGGTTCTGGCGTGTCTACTAATGCATCTGTTTCACCTGCATTAAATAGACCTCAAGAGCAGATTTTTGAGATAGTCAACTTGGCAAATGAGCTTCTACCTCCTCTACCTCAAGGAACTATTTCCTTTCCGCCCAACTTTAATTTGTTTGTGAAAGGACCCGTCATCAAGAAGCCATCTACTAGCGGTTCTGTGAAAGAAGAAGATCCAACTGATAGTGCTCCAGAAGTGTCCGCTCGTGAGAAACTCTTAAAGGATCAGCCTGAGCTCCTCCTCCAGTTTGGAATGGATCTCCTTCCTATTTTAATACAGATCTATGGTTCCAGTGTGAATGGTCCAGTACGTCATAAATGTCTCTCAGGAATTGGAAAATTGATGTACTTCAGCACTCCAGAGATGATACAGTCATTATTGAATGTGACTAATATAGCAAGTTTTCTAGCTGGTGTTTTGGCATGGAAAGATCCACACATTTTGATTCCTGCTCTCCAGATTGCTGAGATTCTTATGGAAAAGCTTCATGAAACATTTTCTAAGATGTTCCTTCGAGAGGGCGTTGTTTATGCCGTTGACCAGCTTATCTTGGCTAATAGCCAAAATACTTCTTCCCAAGCAGCTTCTGTTGAGAAGGATAACAACTCTGCATCTGGAACTTCGTCACACACTCGACGTTACAGGCGGCGCAGTGGAAATATGAATTCGGATGGAAGTTCACTGGACGAAAACAAGAATTCTGTTTCTGGAAGTGGTGTTCCACAGGGTTCAGTCGAGGTTCCATCAATAAATTCTAATCTCCGAACTTCTGTAAGTTCCTACGCCAATGCTTTTAAGACTAAGTACTTCCCTTTAGATCCAGGAGATGTTGAAGTTGGAGTTACAGATGATCTCTTACGTTTGAAGAATCTTTGTGTCAAGTTGAATGCTGGTATTGATGATCAGAAGAGTAAATCAAAAGGAAAGTTGAAAGTGTCAGGGTCTCGCCTAGATGATATTATTACAAATAAGGAAGAGTATTTAACTGGCGTGATATCTGAAATGCTAGTTGAATTGGGCAAAGATGATGGTGTTTCCACTTTTGAATTTATTGGTAGTGGTGTTGTTGGAGTTCTGCTTAACTACTTTTCTTGCGGATACTTTTCTAAAGGAAGAATTTCGGAAGGCGAGTTGCCAAAGCTTCGGCAACAAGTGCTTAAAAGGTTTAAATCATTTATTTCTGTTGCCCTTCCTACAAGCATCAATGAGGGGACAGTAGCTCCTATGACAGTCTTAGTTCAAAAGCTGCAGAGTGCTTTATCCTCGTTGGAGCGTTTTCCAGTTGTCTTGAGCCATTCTTCTAGATCATCCAGTGGTAGTGCGCGGCTTTCCTCTGGGCTAAGTGTATTATCTCAGCCATTTAAGTTGCGACTTTGTCGAGCCCAGGGAGAAAAATCACTCCGTGATTATTCATCAAATATTGTTCTGATCGATCCATTGGCTAGTTTAGCAGCTGTTGAAGAATTTCTGTGGCCTAGAGTTCAGAAAAGTGAATCTGGTCAGAAACCTTCAGCATCTGGTGCAAACTCAGATTCAGGAACTACGCCTCCAGGAAATGTTGCTCCATCAGGGTTAAATTCAACCCCCAGTTCAACCACTCGTCGTTACTCTACTAGGTCTAGATCATCGATGACTATTGGAGAAAGAGCAGGGAAGGAAACTTCACAGGAGAAAAGCACATCAAAGGGGAAGGGGAAAGCTATTCTAAAGCCTGCCTGGGAGGAGAAGAGAGGCTTGCAAACTAGAAGTTCGACTCGTAGAAGAGCCGCTGTGGACAAGGATGCCCAAATGAAGCCAGTAAATGGAGAGACTACATCTGAGGATGAAGAATTGGACCTATCCTCCATCCAGATTGATGATTCTTTAGTGATTGAGGATGATGATATTTCTGATGATGAAGATGATGACCATGATGATGTGCTGCAGGATGACTCTCTTCCTCTTTGTATGCCTGAAAAGGTGCATGATGTCAAATTGGGAGACACAGTTGAAGATGGGGATGCTGGTCCAGCCACAAGTGATGGCCAGATTCATTCTACTTTTGGCTCTAGCAGTAGAGCTGCTACAGTCAGGGGTTCTAATTCTCCTGATCATAGGAGTGGCAATTCTTTTAGTTCAAGGGGAGGTATGTCATTTGCTGCTGCCGCTATGGCTGGGCTTGGACCAGCTAATGGCAGGGGTTTCCGTGGAGGTCGGGATCCACAGGGACGTCCTCTTTTCAGTGGCTCCAATGATAACCCAAAATTACTTTTTTCTTCTGGTGAGAAGCAGCTTGATAGGCATTTGACAATATATCAAGCTGTTCAACGCCAGCTTGTTTTGAATGAAGACGATGATGAGAGGTTTGCCGGTGCTGGCACTGATTTCTTATCTAATGATGGGAGCAGTTTATGGGGCGATATATATACTATCACGTATCAGAGGGCAGATAATCAATCTGAAAGAGCTGCTTTGGCTGGGGAATCAAGCTCCTCAAAATCTAAATGTACCAAATGTGTATCAACATCCAATTCAAATTCAGAGTCCCAATACCATCAAATGTCACTTTTAGATAGTATTTTACAAGGAAAACTTCCATGTGATTTTGACAAATCTAATCCTACATATGATATACTATCTTTATTGCGTGTACTTGAGGGATTGAATCAGCTTGCTCAACGCTTAAGGGCACAGATTGTGTCGGATCATTTTGCAGAGGGAAAGATCACCACACTTGATGAACTGGGTGGAATTGGTGGAAAGGTTCCACATGAGGAATTTATCAACAGTAAGCTTACTCCCAAATTGGCCCGACAAATTCAGGATGCTCTTGCACTATGCAGTGGGAGTCTTCCCTCGTGGTGTTACCAATTGACTAAGGCATGCCCGTTCTTATTTCCTTTTGAGACCCGCCGACAATATTTCTATTCAACTGCATTTGGGCTGTCACGTGCATTATATCGGCTACATCAGCAGCAAGGAGCTGATGGTCTTGGAACAGTAAATGAACGAGAGGGAAGGGTTGGAAGATTGCAGCGCCAGAAGGTTCGTGTCTCCCGTAATCGTATATTGGATTCTGCTGCGAAAGTTATGGAGATGTATTCTAGCCAGAAGGCTGTTCTTGAAGTAGAATATTTTGGTGAAGTGGGAACTGGATTAGGTCCTACCCTTGAGTTCTACACACTTTTAAGTCATGAATTGCAGAGGGCTGGACTAGGAATGTGGAGGTCTAATTCATTGCGAGAGTCAACAGATAGTGGTGAAGATGGACAACTTAGGAAGGCTAAAGGTGGCTCTAGGCTTACTTCTGATGTGGCCAATATTGATATCATCCAATCTCCTCTTGGGTTGTTTCCTCGACCTTGGCCACCAAATGCTGATTCTTCTGATGGCAGCCAATTTTCGAAGGTTATTGAATATTTTCGGCTTGTTGGTCGTGTGATGGCCAAAGCTCTACAAGATGGAAGACTATTGGATCTACCGCTCTCAACAGCATTTTATAAGCTTGTTCTTGGTCAAGATCTTGATTTACATGATATCCTCTCATTTGACCCTGAGCTTGGGAAGACTTTACAAGAATTGCAGGCTCTTGTTTGCCGGAAACAATATTTAGGATCGATAAATGGTGATAATCAAAATACAATTTCCAACTTGTCTTTCCGTGGGATTCCAGTTGAAGATCTCTGCTTGGATTTTACAGTTCCTGGTTATCCAGACTACGTTTTGAGGCCAGGAGATGAAACTGTTAATATTCATAACTTGGAGGAGTACATATCCTTAGTATTAGATGCGACTGTCAAGACTGGAATAATGCGGCAAATGGAAGCATTTACTGCAGGATTCAATCAGGTATTTGACATCACAGCATTACGCATATTCATTCCTCATGAGTTGGACCATTTACTATGTGGCCGTAGAGAATTGTGGAAGGCTGACACACTTGTCGATCATATTAAATTTGATCATGGATACACAGCCAAGAGTCCTGCAATAGTCAATTTTCTTGAGATTATGGGTGAATTCACACCAGAACAGCAGCGAGCTTTCTGCCAGTTTGTTACAGGTGCACCTAGGCTTCCACCAGGTGGCCTTGCAGTGTTAAACCCAAGATTGACCATTGTGAGAAAGCACTCATCAACTGCAACTAACGTAGCAAACAGCACTACGGGGGCTTCTGAATCAGCAGATGATGATTTGCCTAGTGTCATGACATGTGCCAATTACCTTAAGCTTCCTCCGTACTCGACCAAGGTGCCTTTTGGCGGCCGCCGTCAGAGAGCAGCAGTTCCTTCCTTCTACTTTTGGTTCTTTTTCTTTTTTCTTTTGGAGTTTGTACATTCATATTTTAACCATTCTGTTCATCATGTGCTCCTGTTTATTTGCTCTCTGTTTGTTAGAGCAATGGGTGACAATCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCTGCGGATATGTCTATCTTCAGAAACGCTGTCAAAGACTGCCTTGATTATGACCACATACCAACTGAAAAGACTGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGAATCAACTGGTGGCACCTGCTGAGCTTCGCGATCGTTTTTCTGACATTCGCTTTGTTCGTTTGTCTACCATAAAGAATCTGTTGGTTGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGAAGTCCAAAAACAAGCTCTACAGGGAAAGCTTATTGCATCTGGAAACTTAGTTGTTTAGATGAAAACACTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCGCTTTTTAACTCTACTGTACGAAAGGATGCAACGGGCATGGGGTTTTCTTTAAGTGTGTATCAACCAAGCCAATTGTTAAAGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGAAGGATGGGATTGCTTGTACAACCGTAATAAATAGGCGACGTGGCATATACTGTAAATATCATAACTCAAAGGCATCAGAAAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATTATCATCACAAGCCAGAAGGAGTTTACATGGTAGATCCGCTAGCTGGTAAAGTGACTTCTAAGAAGCCAGCACAGCCGGTAAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGCAATGCAGACAAAGTGACCACCAATTCACATTCACAAGGGAAAAGATTCCTTGCTGAGATCACAGGGAAACTTACTAGTAAAAAAGTAAATAAAGAATTAGCCGAACAAAGTCAGCAGAGAATCAGTTCAGAGAAGACGTCAATTTTGAAGTCATCCACCATGAAACTGGATTCAGGAGTTGAAAAGCAACATCCAGATCCAAAAAGAAAGAAAACCGACCATACTCCGGTAGACAAAACCACAAAAGAAACAGGAAAGATGATAGAGTTAGATTATGTTAGTTCAGATGATGATATCGACCTTATATTCACCCGATAA 6936 43.73 METRSRKRAEASSAAPSSSSSGPTTRSTKRARLSGTSPSNLAASTLSITTRSRSTRTQEPSATSTPMDSTNESSGSRRRGKNSDKENSDKGKEKEHEDRIGDRERNAEQSFGLNIEGSGGGEDDDNDSEGGMGVLQQNLSTASSALQGLLRKLGAGLDDLLPSSAIASASSSQQRGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSTGGGQSTLGSATYTGLIRLLSTCASGSALGAKTLLLLGISGILKDILSGSGVSTNASVSPALNRPQEQIFEIVNLANELLPPLPQGTISFPPNFNLFVKGPVIKKPSTSGSVKEEDPTDSAPEVSAREKLLKDQPELLLQFGMDLLPILIQIYGSSVNGPVRHKCLSGIGKLMYFSTPEMIQSLLNVTNIASFLAGVLAWKDPHILIPALQIAEILMEKLHETFSKMFLREGVVYAVDQLILANSQNTSSQAASVEKDNNSASGTSSHTRRYRRRSGNMNSDGSSLDENKNSVSGSGVPQGSVEVPSINSNLRTSVSSYANAFKTKYFPLDPGDVEVGVTDDLLRLKNLCVKLNAGIDDQKSKSKGKLKVSGSRLDDIITNKEEYLTGVISEMLVELGKDDGVSTFEFIGSGVVGVLLNYFSCGYFSKGRISEGELPKLRQQVLKRFKSFISVALPTSINEGTVAPMTVLVQKLQSALSSLERFPVVLSHSSRSSSGSARLSSGLSVLSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAVEEFLWPRVQKSESGQKPSASGANSDSGTTPPGNVAPSGLNSTPSSTTRRYSTRSRSSMTIGERAGKETSQEKSTSKGKGKAILKPAWEEKRGLQTRSSTRRRAAVDKDAQMKPVNGETTSEDEELDLSSIQIDDSLVIEDDDISDDEDDDHDDVLQDDSLPLCMPEKVHDVKLGDTVEDGDAGPATSDGQIHSTFGSSSRAATVRGSNSPDHRSGNSFSSRGGMSFAAAAMAGLGPANGRGFRGGRDPQGRPLFSGSNDNPKLLFSSGEKQLDRHLTIYQAVQRQLVLNEDDDERFAGAGTDFLSNDGSSLWGDIYTITYQRADNQSERAALAGESSSSKSKCTKCVSTSNSNSESQYHQMSLLDSILQGKLPCDFDKSNPTYDILSLLRVLEGLNQLAQRLRAQIVSDHFAEGKITTLDELGGIGGKVPHEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLHQQQGADGLGTVNEREGRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHELQRAGLGMWRSNSLRESTDSGEDGQLRKAKGGSRLTSDVANIDIIQSPLGLFPRPWPPNADSSDGSQFSKVIEYFRLVGRVMAKALQDGRLLDLPLSTAFYKLVLGQDLDLHDILSFDPELGKTLQELQALVCRKQYLGSINGDNQNTISNLSFRGIPVEDLCLDFTVPGYPDYVLRPGDETVNIHNLEEYISLVLDATVKTGIMRQMEAFTAGFNQVFDITALRIFIPHELDHLLCGRRELWKADTLVDHIKFDHGYTAKSPAIVNFLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPRLTIVRKHSSTATNVANSTTGASESADDDLPSVMTCANYLKLPPYSTKVPFGGRRQRAAVPSFYFWFFFFFLLEFVHSYFNHSVHHVLLFICSLFVRAMGDNLLSDDESPRRAGPADMSIFRNAVKDCLDYDHIPTEKTGKTNRSKASNDVSIEKFSGLRMRNQLVAPAELRDRFSDIRFVRLSTIKNLLVGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENTVSVFLFGDAYKRNCKELAGTVFALFNSTVRKDATGMGFSLSVYQPSQLLKMGTSDDYGVCKGKKKDGIACTTVINRRRGIYCKYHNSKASEKYSTTTRTELKGGNLRTAFRDYHHKPEGVYMVDPLAGKVTSKKPAQPVKLLSVEGLKRALSNADKVTTNSHSQGKRFLAEITGKLTSKKVNKELAEQSQQRISSEKTSILKSSTMKLDSGVEKQHPDPKRKKTDHTPVDKTTKETGKMIELDYVSSDDDIDLIFTR 2311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29090024 29110053 + CePI673135_02g012510.1 Cec02g1251 196304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1251 2311 MobiDBLite consensus disorder prediction 1083 1167 - -
Cec02g1251 2311 Gene3D - 179 660 IPR011989 -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 508 528 - -
Cec02g1251 2311 Gene3D Hect, E3 ligase catalytic domain 1762 1874 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 2241 2291 - -
Cec02g1251 2311 SUPERFAMILY Hect, E3 ligase catalytic domain 1459 1870 IPR035983 GO:0004842(InterPro)
Cec02g1251 2311 CDD HECTc 1467 1870 IPR000569 GO:0004842(InterPro)
Cec02g1251 2311 Pfam HECT-domain (ubiquitin-transferase) 1583 1870 IPR000569 GO:0004842(InterPro)
Cec02g1251 2311 Gene3D Hect, E3 ligase catalytic domains 1407 1653 - -
Cec02g1251 2311 FunFam HECT ubiquitin protein ligase family protein KAK 171 485 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 680 708 - -
Cec02g1251 2311 Pfam Primase zinc finger 2106 2148 IPR015408 GO:0005634(InterPro)|GO:0006260(InterPro)
Cec02g1251 2311 Coils Coil 1331 1351 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 2241 2262 - -
Cec02g1251 2311 FunFam E3 ubiquitin-protein ligase UPL3 1408 1652 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 74 106 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 1109 1123 - -
Cec02g1251 2311 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 135 1870 IPR045322 GO:0000209(PANTHER)|GO:0006511(InterPro)|GO:0043161(PANTHER)|GO:0061630(InterPro)|GO:0061630(PANTHER)
Cec02g1251 2311 MobiDBLite consensus disorder prediction 511 528 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 1 134 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 1011 1054 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 957 1070 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 10 73 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 1133 1167 - -
Cec02g1251 2311 FunFam DNA replication licensing factor mcm10 1967 2141 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 957 1010 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 653 708 - -
Cec02g1251 2311 Pfam MCM10 OB-fold 1977 2103 IPR055065 -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 1083 1101 - -
Cec02g1251 2311 Gene3D - 1966 2140 IPR012340 -
Cec02g1251 2311 SMART arm_5 209 250 IPR000225 GO:0005515(InterPro)
Cec02g1251 2311 SMART arm_5 335 373 IPR000225 GO:0005515(InterPro)
Cec02g1251 2311 SMART arm_5 292 332 IPR000225 GO:0005515(InterPro)
Cec02g1251 2311 SMART hect_3 1478 1888 IPR000569 GO:0004842(InterPro)
Cec02g1251 2311 MobiDBLite consensus disorder prediction 653 669 - -
Cec02g1251 2311 MobiDBLite consensus disorder prediction 1183 1207 - -
Cec02g1251 2311 ProSiteProfiles HECT domain profile. 1491 1890 IPR000569 GO:0004842(InterPro)
Cec02g1251 2311 MobiDBLite consensus disorder prediction 2263 2291 - -
Cec02g1251 2311 SUPERFAMILY ARM repeat 177 646 IPR016024 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1251 Cec-Chr2:29090024 Cec10g2064 Cec-Chr10:35354506 1.50E-257 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1251 K10590 - csv:101218793 3306.92