Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1269 ATGGGAGCTTCCATTCAAGTGTTAATTGCTATGCGGATATTTTGGAGGGTTGTTTGGGATGGTCTCCTATGGTACAAAGATAGTGGGCAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAACAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGGCCGGGCCATATGGTACCTTTGTTGGTGTGTATGATGGGCATGGAGGGCCCGAGACATCTCGTTATGTAAATGATCACCTTTTCCAGCATCTTAAAAGGTTTACTTCAGAGCAACAATCCATGTCAGTGGATGTCATACGGAAGGCATTTCAAGCTACCGAAGAGGGGGTCATTGCTCAAGTTTCGAAACAATGGTCAATGAGGCCACAAATTGCAGCTGTTGGATCTTGCTGCCTTGTCGGTGTAATTTGTGGTGGAACCCTTTACATTGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAGTTGTAAAGGCAACAGGGGAAGTTTTGTCCGTTCAGTTGTCAGCTGAGCATAATGCATCTATAGAGTCTGTGAGGCAGGAGCTCCGTGCCCTGCATCCTGATGATCCACATATTGTAGTCTTGAAGCATAATGTATGGCGCGTGAAGGGCCTTATACAGGTTTCTCGATCTATTGGTGATGTCTATTTAAAGAGAGCTGAGTTCAACCGAGAGCCTCTTTATGCTAAGTTCCGCCTTCGTGAACCCATCAAAAAACCCATACTGAGTGCCGAACCATCTATTTCAGTGCTCAAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCAGATGGGCTTTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATTGTCCAAAACCATCCACGTAATGGAAGTGCAAGAAGGCTGGTGAAAGTAGCACTGCAAGAGGCAGCAAAGAAGAGAGAAATGAGGTACTCTGATTTGAAGAAGATTGACCGTGGTGTACGGCGACATTTCCACGATGACATCACAGTGATTGTTGTGTTTCTCGACTCAAACCTTGTAGCTTCCAACAGAGATAAAGTGGAGACAGGCATCAATCCTTTTACTATACACTATACTGAAACTCATCAGATGAATACAGATAACATCTTCACAGAAGACAATACTGGTCAAATACGTCTTTTGAAGGTATATTCTCTCTTCTCTTATCTCTGCAGATTAGGCCCCTATGATATAGTCGTGTATTTTAAGCTAAAGATCAAATCACAGATTTCATGGAAGAATCCACCATATGTTAAAGAAATTGTTCCTTGTAGTGTAGGTATGGGATGGGATTGGATGAGGAGTGGAGAAAAGAAGAAATAG 1347 43.28 MGASIQVLIAMRIFWRVVWDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFTSEQQSMSVDVIRKAFQATEEGVIAQVSKQWSMRPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKKPILSAEPSISVLKLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVASNRDKVETGINPFTIHYTETHQMNTDNIFTEDNTGQIRLLKVYSLFSYLCRLGPYDIVVYFKLKIKSQISWKNPPYVKEIVPCSVGMGWDWMRSGEKKK 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29348677 29352324 + CePI673135_02g012690.1 Cec02g1269 196322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1269 448 Gene3D - 25 355 IPR036457 -
Cec02g1269 448 Pfam Protein phosphatase 2C 65 312 IPR001932 -
Cec02g1269 448 SUPERFAMILY PP2C-like 46 344 IPR036457 -
Cec02g1269 448 PANTHER PROTEIN PHOSPHATASE 28 342 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec02g1269 448 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169(InterPro)
Cec02g1269 448 ProSiteProfiles PPM-type phosphatase domain profile. 35 343 IPR001932 -
Cec02g1269 448 FunFam Phosphatase 2C family protein 24 353 - -
Cec02g1269 448 CDD PP2Cc 36 343 IPR001932 -
Cec02g1269 448 SMART PP2C_4 27 341 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1269 Cec-Chr2:29348677 Cec04g1767 Cec-Chr4:36615021 4.80E-160 dispersed
Cec02g0716 Cec-Chr2:7509883 Cec02g1269 Cec-Chr2:29348677 2.10E-108 transposed
Cec06g0452 Cec-Chr6:5109794 Cec02g1269 Cec-Chr2:29348677 1.60E-116 transposed
Cec10g1769 Cec-Chr10:32415335 Cec02g1269 Cec-Chr2:29348677 1.70E-116 transposed
Cec02g0415 Cec-Chr2:3930559 Cec02g1269 Cec-Chr2:29348677 8.70E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1269 - - - 0.0