Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1278 ATGAGAGCTCATCGTTTGAGCTTCTTCGCTTCCCTTATATTTTTATTCCCTACATTCATCACAGCCACAGGCTTCACGCTTCTCCACGATTCCTCCATTTCCTACAGGAGAATTCTGCATCAGCCGCTCTTTCCGGTTGCCTCTGAGCCGCCGCCTGACATTGACTTGTCTCCACCGCCCCCGCCGCCGGATTCTCCTTCCAACGATCAGCCGTTTTTCCATGAGCTGCCCACCAGTCCAGATCAGAGTCAACCTCCTCCTTCCTCATCTAATGGAACTATGCCAATCCCTGCCTCTACGGCGCAACCGTCCAAGCCCACCAAGACTGTTGCAATTGCCATTTCCGTTGGGATTGTGACTTTGGGGATGCTTTCAGCTCTCGCTTTCTTTTTGTATCGTCACCGTGCGAAGCATCCGGGGGAGTCGCAGAAGCTTGTTGGAGGGAATAATCCGGAGAGATTTGTGGAGGACTCGAGAGCGCCGCCCTCGAGTTTTTTCTATATCGGAACTGTTGAGCCGAGTCAGAGCTCTATTGTGGAGCAGAATGGTGCCAATGGTGCTAACAGTTCGCCTTATCGCAAGCTGAATTCGATTAAGAGGTCGGATCGGTATCGTCCGAGTCCAGAGTTGCAGCCACTGCCGCCACTGCCAAAACCGCCGGTGGCTATGTCGCCTCCGGCTTTGTCGTCTTCCGATGAGGAAAGCCAGGACACGGCATTTCATACTCCGCAATGCTCGTCGATTGTTAGTCACGATGATGGCTATTTTTCACCGGCTTCTCGTCGGAGTAATTCGGTTAAGAGCTGTTCCACGGCAAGTTTCAAGAATGACCATATGAATTCCAATCCTCCTCCCATTCCTCATTCCAAAAGGACGTCTCCTAAATCGAGATTTTCGGTTTCTTCGACGAAGCGCACTTCGTCTCAGCCTCAGCCACCGCCGCCGCCGCCTCCTCCACCGCGTCCGTTTGATGATTTTCGCGAAATTCCGAATTCGAAAGAGACAATGCCTTTCTCGTCCACGAGACCTAAATTTTCGAAGCCTCCGCCTCCGCCGAATTTGGCGCTTCTTCAAACAATTAGCAATTCAACCACATTTCCTCAAGTTCCGCAACCTGCTGTAGCTCCACCTCCGCCGCCCCCACCCCCACCCCCACCTCCACCTCCGCGACCACCGGCGCGTCCGGCCTCCTATTCAACGCCACAGAAACTAGGGTTATCAGAAACCAGAATGTCGGCAGTCACTCCTCCAGACTCCTCTAAGTCACAATCCTACTCAACAGCGAGGTCAAACTCTTCCCCGAAATCCACTCCGAGTTCTGTGACAACAAATTCTGCTAAAGAAGACGTTGCCCCGAGGATTAATTCTATGGAGAGGCTCGAAGCAGAGGATGCAGAAGGTGCAAAACCGAGATTGAAGCCCTTGCACTGGGACAAAGTACGAGCAACCTCAGACCGAGCTACAGTTTGGGATCAACTTAAATCAAGCTCATTCCAATTAAACGAGGACATGATGGAGACACTGTTCGGCTTCAATTCTGCAAGTTCTGTTCCCAAAGAGGCCACGAGAAAGTCTGTTCTTCCCCCCGTTGAGAAGGAAAATAGGGTATTGGACCCAAAAAAGTCTCAGAACATAGCAATACTTCTAAGAGCACTTAATGTCACGCGCGATGAGGTGATCGAAGCTCTTCAAGATGGTAACCCAGAAGGCTTTGGTACTGAGCTCTTAGAAACTCTTGTAAAGATGGCTCCAACCAAAGAGGAAGAGATAAAACTCAGAGAGTACTGTGGTGATGTTTCAAAATTAGGGACTGCAGAAAGATTTCTCAAGGCAGTGCTTGAAGTTCCATTTGCCTTTAGAAGAGTTGAGGCAATGCTGTACAGAGCCAATTTTGATTCAGAAGTAAAGTACCTAAGGAAATCTTTCCAAACCCTTGAGGGTGCAAGTGAAGAATTGAAGAACAGTAGACTTTTTCTTAAACTCCTTGAAGCGGTTCTTAAGACAGGAAATAGGATGAATGTTGGTACGAATCGTGGTGATGCTAAAGCCTTTAAGCTTGAAACCCTCTTAAAATTAGTCGATATAAAGGGAACGGATGGGAAGACAACATTGCTTCATTTTGTTGTTCAAGAAATCATCAGATCAGAAGGTGGTGCTGATTCAACTAATGACAACCTTCAACCCCGTTCGCAAGCTAAAATCGAGGATGAATTCAGAAAGCAGGGCTTGCAAGTTGTGGCTGGACTAAGCAGAGACCTCACCAATGTAAAAAAAGCGGCAGGGATGGACTCAGACGTCTTGAGCAGTTATGTCACAAAGCTCGAGATGGGGCTTGAAAAAGTAAGGTTGGTTTTGCAATTTGAAAGGCCAGGAATGCAGGGAAAATTCTTCAACTCAATGAAAACATTCTTGAAAGAGGCAGAAGAGGAAATAGTCAGGATTAAAGCTGACGAAAGGCAAGCTTTATCGCTTGTGAAAGCAGTCACAGAGTATTTCCATGGTGATGCTGCTAAGGAGGAAGCACATCCCTTCCGAATATTCATGATCGTTCGGGATTTCCTAACCGTACTGGATCAAGTATGCAAAGAAGTTGGGAGAATGCAAGACGGAGTAATGGTTGGTGCTGCCAGATCCTTTCGGATATCTGCTACAGCCTCACTCCCAGTCCTCAGCAGGTATAACGTCAGACACGACCGAAGCTCCGACGAGGATAGCTCATCTCCATGA 2727 48.37 MRAHRLSFFASLIFLFPTFITATGFTLLHDSSISYRRILHQPLFPVASEPPPDIDLSPPPPPPDSPSNDQPFFHELPTSPDQSQPPPSSSNGTMPIPASTAQPSKPTKTVAIAISVGIVTLGMLSALAFFLYRHRAKHPGESQKLVGGNNPERFVEDSRAPPSSFFYIGTVEPSQSSIVEQNGANGANSSPYRKLNSIKRSDRYRPSPELQPLPPLPKPPVAMSPPALSSSDEESQDTAFHTPQCSSIVSHDDGYFSPASRRSNSVKSCSTASFKNDHMNSNPPPIPHSKRTSPKSRFSVSSTKRTSSQPQPPPPPPPPPRPFDDFREIPNSKETMPFSSTRPKFSKPPPPPNLALLQTISNSTTFPQVPQPAVAPPPPPPPPPPPPPPRPPARPASYSTPQKLGLSETRMSAVTPPDSSKSQSYSTARSNSSPKSTPSSVTTNSAKEDVAPRINSMERLEAEDAEGAKPRLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGFNSASSVPKEATRKSVLPPVEKENRVLDPKKSQNIAILLRALNVTRDEVIEALQDGNPEGFGTELLETLVKMAPTKEEEIKLREYCGDVSKLGTAERFLKAVLEVPFAFRRVEAMLYRANFDSEVKYLRKSFQTLEGASEELKNSRLFLKLLEAVLKTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGGADSTNDNLQPRSQAKIEDEFRKQGLQVVAGLSRDLTNVKKAAGMDSDVLSSYVTKLEMGLEKVRLVLQFERPGMQGKFFNSMKTFLKEAEEEIVRIKADERQALSLVKAVTEYFHGDAAKEEAHPFRIFMIVRDFLTVLDQVCKEVGRMQDGVMVGAARSFRISATASLPVLSRYNVRHDRSSDEDSSSP 908
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29465409 29469318 + CePI673135_02g012780.1 Cec02g1278 196331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1278 908 MobiDBLite consensus disorder prediction 400 450 - -
Cec02g1278 908 Pfam Formin Homology 2 Domain 467 857 IPR015425 -
Cec02g1278 908 MobiDBLite consensus disorder prediction 208 224 - -
Cec02g1278 908 SUPERFAMILY Formin homology 2 domain (FH2 domain) 379 868 - -
Cec02g1278 908 MobiDBLite consensus disorder prediction 49 106 - -
Cec02g1278 908 ProSiteProfiles Formin homology-2 (FH2) domain profile. 462 883 IPR015425 -
Cec02g1278 908 Gene3D Formin, FH2 domain 456 868 IPR042201 -
Cec02g1278 908 Coils Coil 804 824 - -
Cec02g1278 908 MobiDBLite consensus disorder prediction 228 307 - -
Cec02g1278 908 MobiDBLite consensus disorder prediction 308 325 - -
Cec02g1278 908 MobiDBLite consensus disorder prediction 49 68 - -
Cec02g1278 908 PANTHER FORMIN-RELATED 19 902 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cec02g1278 908 MobiDBLite consensus disorder prediction 71 106 - -
Cec02g1278 908 MobiDBLite consensus disorder prediction 198 467 - -
Cec02g1278 908 SMART it6_source 462 872 IPR015425 -
Cec02g1278 908 MobiDBLite consensus disorder prediction 452 467 - -
Cec02g1278 908 MobiDBLite consensus disorder prediction 370 396 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1278 Cec-Chr2:29465409 Cec07g0284 Cec-Chr7:2808091 1.20E-144 dispersed
Cec02g1278 Cec-Chr2:29465409 Cec02g0866 Cec-Chr2:10756652 3.10E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1278 K28090 - csv:101208011 1447.57