Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1286 ATGAAAGAGAAAAATGAAGAGAGAAAACTAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATCCGAGAGCCTAATAAACGCTCTCGAATTTGGCTCGGTTCTTATTCTTCTCCCGTCGCCGCCGCCCGTGCCTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCCCGCCTTAATTTTCCTGACTTTTTCACCACCGTTGACCGCTCCTTCCCTCTCTCCGCCGCTGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCATGTCGACGCCCTCGAGTCGTCTCTCCGACATCACTTCGTCAATTCCTCCAACCAAAGTCCCAACCCCACGAAGCTTCGTTCTTCTTCAAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCTGACCCGGAAGACGCCGATGGCGACTGCGATAGCACTCATTGGACAAGCTGA 465 54.41 MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPDFFTTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSNQSPNPTKLRSSSSGFSDRVDLNKFPDPEDADGDCDSTHWTS 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29535832 29536296 + CePI673135_02g012860.1 Cec02g1286 196339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1286 154 MobiDBLite consensus disorder prediction 134 148 - -
Cec02g1286 154 MobiDBLite consensus disorder prediction 108 154 - -
Cec02g1286 154 CDD AP2 11 70 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1286 154 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1286 154 PRINTS Ethylene responsive element binding protein signature 51 71 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1286 154 ProSiteProfiles AP2/ERF domain profile. 12 69 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1286 154 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 145 - -
Cec02g1286 154 SMART rav1_2 12 75 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1286 154 Gene3D AP2/ERF domain 11 70 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1286 154 FunFam Ethylene-responsive transcription factor 2 11 70 - -
Cec02g1286 154 MobiDBLite consensus disorder prediction 108 131 - -
Cec02g1286 154 Pfam AP2 domain 12 61 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec02g1286 154 SUPERFAMILY DNA-binding domain 12 70 IPR016177 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1286 Cec-Chr2:29535832 Cec05g2232 Cec-Chr5:33814343 1.40E-39 dispersed
Cec02g1286 Cec-Chr2:29535832 Cec04g1387 Cec-Chr4:33511712 1.50E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29049 PF00847 AP2 2.90E-11 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1286 K09286 - csv:101209150 244.202