Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g1297 | ATGTTCAAGGAATTAGGGACCTGTGATCTTCATCCTCAACATGGGTTATCCAAGGTTTGCATTCTCATGTCACTAAAAAATCGTTGGGGCCAAGAACATGAAGGGATAGACCTTCAAATACTTAGGTTCTTGGATATGGGCAAGATGGAAGCTAAAATTCATGATCTTAAGGTGCCTCTAAATCCACGGGGCCTCAATAATGAAGACAGAGCAGTAGAAATCATAGAAGCCGGAGGATTCCCCGGCGACGAATTTTCAGAACAAGGCATTGCAGCAACATGTCGTCTAAGAGTCCCAAGAATAGGCTGCCCAGCCAAAGTCTGTTCTCTTCAAAAAGCCCTAGCCATGGTCCACGGCGTAAAACGAGCAACCGTAGTTCTCGAAATCGAAGAAGCCAAAGTCCTCTTCGATCCAAATTTAACCACAGAGACCCTAATCCTCACAGAAATCGACAATTCCGGCTTCGAAGCGGAGCTCATCTCCGCTGCAGACGAAGCCTACAAAGTTCACATAAAACTTAATCGAGCGAGCCCCGGAGACATGCCCGCCATCAAATCCTCTCTCGAGCAAGCTCCGGGAGTGAACTGTGTGGAAATGGAGGCGATAGGGCGGATGGTAGCCATCGGCTACGACCCTGATCGGACGGGTCCAAGGTGCCTTCTGCAGTTCCTGGAGAAGTATGGAGCAAGCTTGTATGTGCCTCCGAAGAGAAGAGATGTGGAGCAGCTTCAAGAAGCTTGTGCTTATAGGAATTTGTTCTTGCTGAGCTGCTTGTTTTCTGTTCCAGTGGTGGCTTTTGCAATGGTGCTTCCAATGCTTCCTCCTTATGGAGATTGGTTGAATTTTAGGGTTTGCAGTATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACTCCAGTCCAGTTCCTTGCTGGTCGCAGATTTTATGTAGGATCATACCGCGCATTACAACGGAAATCTGCAAATATGGATGTTTTGGTTGCTGTAGGCACCAATGCAGCTTACTTTTACTCAGTATACATAGTTTTTAAAGCATCCACTTCCAACTCTTTTAAGGGGAAAGATTTCTTTGAGACTAGCTCCATGTTGATCTCCTTCATTCTACTTGGAAAATATTTGGAGGTCATGGCCAAAGGCAAATCATCAGATGCTTTAGCACAGCTTGCTCATCTTGCTCCTGATACAGCTTGTTTGATGACCTTTGATGATCATGGAAATTTGCTATCAGAGGTGGAGATTGATACCCAACTCATACAGAGGAATGACATAATTAAGATTGTTCCTGGGGCAAAAGTTCCTGTTGATGGGGTTGTTATTAGTGGTGAAAGCAATGTGAATGAGAGTACAATTACAGGAGAAGCAAGATCCATTGGCAAATCAACTGGTGATAAGGTTATTGGAGGGACTGTCAATGAAAATGGATGCTTATTTGTTAAAACCACTCATGTTGGATCTGATACTACACTTTCTCGAATTGTACAACTCGTGGAATCGGCTCAGCTATCACGAGCCCCAGCTCAAAAATTAGCAGATCAGATATCGAAGTTCTTTGTTCCTGTTGTTGTTGTGGCAGCATCTGTGACATGGCTGGGATGGTTAATTTGTGGAGAACTTGGTTTATACCCCAAACATTGGATACCAAAAGGCATGGATGAGTTTGAACTTGCCCTGCAATTTGCCATTTCAGTGCTGGTGATTGCATGTCCATGTGCCCTTGGTTTAGCAACACCGACTGCGATCATGGTTGCGTCGGGAAAAGGTGCTTCTCTAGGTGTGCTCATTAAAGGGGCAAGTGCACTTCAAAATGCATACAAGGTGAAAACAGTAGTTTTTGACAAGACTGGAACTCTTACCGTTGGGAGGCCAGAGGTAGTTAGTGTTGTGCTTTTTTCTACATTTCCAATGCAGGAGCTCTGTGATGTAGCAATAGCAATTGAGTCAAACAGCGAACACCCTCTAGCAAAATCTGTAGTGGAGCATGCAAAGAAAATGAGAAAGAAGTTTGGGGCCCGAAGTGAATGTCGCAAACGCATCCAGAACTTCGAGGTGTTCCCGGGAGGAGGGGTTGGAGGAAGAATTGATAGAAAGACAGTTTTAGTAGGAAACAGAAGGCTCATGCGAGCTCACAACATTGTTGTTGGTCCTCAAGTTGATCGGTATGTTATAGAAAACGAGCGACTGGCTCAAACATGTGTCTTGGTGGCTATTAATGGCAGGGTAGCAGGAGGTTTTGGTGTTATAGATGCGCCAAAGCCTGGGACTAAAGCTGTCATATCATTTCTTCGTTCGATTGGCATCTCAACCATAATGGTCACCGGAGATAACTGGGCCACAGCCTTCGCGGTTGCAAGAGGGGTCGGGATTAGTGAAGTCTTTGCAGAGATGGATCCAATTGGAAAAGCTAACAAGATTAGATCCTTAAAGACGTCAGGGAATATTGTGGCAATGGTGGGAGATGGAGTAAATGACTCACATGCCTTAGCTGCAGCTGATGTCGGTATTGCAATTGGTGCTGGAACAAATATTGCTATTGAAGCAGCTGATATTGTTCTAATGCGAAGCAATTTAGAAGATGTGGTTACTGCTATAGATCTCTCAAGACAAACTGTTTATCGTATATGGCTTAACTACATTTGGGCTCTTGGCTACAATATCATCGGCATGCCTATTGCTGCCGGAATCCTATATCCCTTCTTTGGAATCCGATTGCCACCGTGGCTTGCCGGTGCCTGTATGGCTGCTTCCTCCCTTAGTGTTGTATGTTCTTCTCTCTTATTGAAATGTTATAGGAGACCCTTGAGTTTTCAATCCACTTGA | 2823 | 44.74 | MFKELGTCDLHPQHGLSKVCILMSLKNRWGQEHEGIDLQILRFLDMGKMEAKIHDLKVPLNPRGLNNEDRAVEIIEAGGFPGDEFSEQGIAATCRLRVPRIGCPAKVCSLQKALAMVHGVKRATVVLEIEEAKVLFDPNLTTETLILTEIDNSGFEAELISAADEAYKVHIKLNRASPGDMPAIKSSLEQAPGVNCVEMEAIGRMVAIGYDPDRTGPRCLLQFLEKYGASLYVPPKRRDVEQLQEACAYRNLFLLSCLFSVPVVAFAMVLPMLPPYGDWLNFRVCSMLTVGMVLKWIFCTPVQFLAGRRFYVGSYRALQRKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFKGKDFFETSSMLISFILLGKYLEVMAKGKSSDALAQLAHLAPDTACLMTFDDHGNLLSEVEIDTQLIQRNDIIKIVPGAKVPVDGVVISGESNVNESTITGEARSIGKSTGDKVIGGTVNENGCLFVKTTHVGSDTTLSRIVQLVESAQLSRAPAQKLADQISKFFVPVVVVAASVTWLGWLICGELGLYPKHWIPKGMDEFELALQFAISVLVIACPCALGLATPTAIMVASGKGASLGVLIKGASALQNAYKVKTVVFDKTGTLTVGRPEVVSVVLFSTFPMQELCDVAIAIESNSEHPLAKSVVEHAKKMRKKFGARSECRKRIQNFEVFPGGGVGGRIDRKTVLVGNRRLMRAHNIVVGPQVDRYVIENERLAQTCVLVAINGRVAGGFGVIDAPKPGTKAVISFLRSIGISTIMVTGDNWATAFAVARGVGISEVFAEMDPIGKANKIRSLKTSGNIVAMVGDGVNDSHALAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFFGIRLPPWLAGACMAASSLSVVCSSLLLKCYRRPLSFQST | 940 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 29662631 | 29682420 | + | CePI673135_02g012970.1 | Cec02g1297 | 196350 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g1297 | 940 | NCBIfam | HAD-IC family P-type ATPase | 365 | 896 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cec02g1297 | 940 | Gene3D | - | 380 | 502 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase signature | 521 | 535 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase signature | 382 | 400 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase signature | 310 | 329 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase signature | 796 | 813 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase signature | 892 | 906 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase signature | 362 | 381 | - | - | |
Cec02g1297 | 940 | CDD | HMA | 96 | 158 | IPR006121 | GO:0046872(InterPro) | |
Cec02g1297 | 940 | SUPERFAMILY | HMA, heavy metal-associated domain | 93 | 165 | IPR036163 | GO:0046872(InterPro) | |
Cec02g1297 | 940 | Gene3D | - | 91 | 165 | - | - | |
Cec02g1297 | 940 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 65 | 936 | - | - | |
Cec02g1297 | 940 | Gene3D | - | 579 | 875 | IPR023214 | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase 1 signature | 288 | 308 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase 1 signature | 308 | 333 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase 1 signature | 119 | 142 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase 1 signature | 253 | 274 | - | - | |
Cec02g1297 | 940 | PRINTS | Copper-transporting ATPase 1 signature | 93 | 118 | - | - | |
Cec02g1297 | 940 | SUPERFAMILY | HAD-like | 610 | 925 | IPR036412 | - | |
Cec02g1297 | 940 | ProSiteProfiles | Heavy-metal-associated domain profile. | 92 | 158 | IPR006121 | GO:0046872(InterPro) | |
Cec02g1297 | 940 | FunFam | Copper-transporting ATPase 1, putative | 380 | 502 | - | - | |
Cec02g1297 | 940 | CDD | P-type_ATPase_Cu-like | 253 | 915 | - | - | |
Cec02g1297 | 940 | PRINTS | P-type cation-transporting ATPase superfamily signature | 612 | 626 | - | - | |
Cec02g1297 | 940 | PRINTS | P-type cation-transporting ATPase superfamily signature | 744 | 755 | - | - | |
Cec02g1297 | 940 | PRINTS | P-type cation-transporting ATPase superfamily signature | 766 | 776 | - | - | |
Cec02g1297 | 940 | PRINTS | P-type cation-transporting ATPase superfamily signature | 842 | 854 | - | - | |
Cec02g1297 | 940 | PRINTS | P-type cation-transporting ATPase superfamily signature | 448 | 462 | - | - | |
Cec02g1297 | 940 | PRINTS | P-type cation-transporting ATPase superfamily signature | 819 | 838 | - | - | |
Cec02g1297 | 940 | Gene3D | - | 619 | 697 | IPR023299 | GO:0000166(InterPro) | |
Cec02g1297 | 940 | Gene3D | - | 698 | 750 | IPR023299 | GO:0000166(InterPro) | |
Cec02g1297 | 940 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 360 | 604 | IPR023298 | - | |
Cec02g1297 | 940 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 614 | 620 | IPR018303 | - | |
Cec02g1297 | 940 | Pfam | E1-E2 ATPase | 411 | 590 | - | - | |
Cec02g1297 | 940 | FunFam | Probable copper-transporting ATPase HMA5 | 744 | 876 | - | - | |
Cec02g1297 | 940 | SFLD | C1.7: P-type atpase like | 594 | 871 | - | - | |
Cec02g1297 | 940 | SUPERFAMILY | Calcium ATPase, transduction domain A | 412 | 498 | IPR008250 | - | |
Cec02g1297 | 940 | Pfam | haloacid dehalogenase-like hydrolase | 608 | 833 | - | - | |
Cec02g1297 | 940 | NCBIfam | heavy metal translocating P-type ATPase | 325 | 928 | IPR027256 | GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro) | |
Cec02g1297 | 940 | SFLD | p-type atpase | 594 | 871 | IPR044492 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1297 | Cec-Chr2:29662631 | Cec10g0935 | Cec-Chr10:20610313 | 3.90E-95 | dispersed | |
Cec01g0274 | Cec-Chr1:2750086 | Cec02g1297 | Cec-Chr2:29662631 | 8.10E-245 | transposed | |
Cec04g0574 | Cec-Chr4:23846845 | Cec02g1297 | Cec-Chr2:29662631 | 6.90E-252 | transposed | |
Cec04g2273 | Cec-Chr4:40363961 | Cec02g1297 | Cec-Chr2:29662631 | 1.70E-192 | transposed | |
Cec05g1746 | Cec-Chr5:29055431 | Cec02g1297 | Cec-Chr2:29662631 | 4.00E-89 | transposed | |
Cec02g1297 | Cec-Chr2:29662631 | Cec04g1453 | Cec-Chr4:34114404 | 1.50E-22 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g1297 | K17686 | - | csv:101214276 | 1502.26 |