Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g1327 ATGGATACCTTGTTCAGGTTGGTCAATGATCTTGAATCCTCTAATCAACATTCTTACAACAATTCTAGCAGCAGCTCAAAGAATTGTAGTGATCAAAATCATTATTACCATCTTCAAAAGCCACAATCTGAAGAATGCTTCAACAATTTGTTCATGGAGGAAGAAGACCATTTCTCTGCATCCTCTTCTTTAGATCATAATCATCACCACCAACTCCCACAGTTTCAATGTTCTACCACGGGGACTAGTACTACATCCACCGGTACTACAGTTCCAAGGGATGAGTGGTTCTCTTCCTTCACCGAAGAGTTGAACTTTGAATTCTCTGATGATTGGGCATCCACGATACTCCTCCAAACAGCCATCGCCATTGTCGACAACAACACCAGTCGAATCCAACAACTCATGTGGATGTTGAATGAGCTCGGTTCTCCATATGGGGACATTGATCAAAAGCTAGCATTCTACTTCCTTCAAGGCATGTTTAGTCGCGTCACCGACTCCGGTGCCAAGTGGTACGGGACGTTGGTAGCGGCGTCGGAGAAACAGTCGTGTTTCGAGTCGATGAGAAGAATGGTGCTGAAGTTTGAGGAGGTGAGTCCATGGATGACATTTGGTCATGTTGCTTCAAATGGTTGGATTATGGAAGCTTTACAAGGTGAAAAGAAGTTGCATATAATTGATATGGCCGGAAACTCCTCATTTTGCACTCAATGGCCCACTTTTATTGAAGCTCTCGCAACACAATCGGACCAGACTCCGCACCTTACCCTCACATTGTTGGTTGCAGCCAAATCCGACGGAACCATACGAGCCCATAAGAAATTGGTGAAAGAAATAAGTAGAAGACTAGAGAAATTCGCAAGGCTTATGGGAGTTTCCTTCAGATTCAAACCCATTTTCCACTACGGCGACGTTTCACAGTTTGATTTTACACACTTAGGCATCAAACACGACGAGGCCCTCGCCGTCAACTGTGCCGGCGCCTTGCGCTCCGTCGCCCCCCTCGACAACCGCCGCGATTTTCTCATATCCTTGTTCCGATCTTTGCGTCCCAGGATTATCACCGTCGTAGAGGAGGAGGCCGATCTCGACCCCCACAGCGGCGTTGACTTTGTCAAACACATTCAGGAGTGTTTACGCTGGTTTAGGCTTTACTTTGATTCGTTGGACGGAAGTTTCCCGACCGCCACCGACGAGCAGTTCATGCTTGAACGCGCCGCCGGACGCGCCGTCGTGGATTTGCTTGCACGCGTGCCGGCGGAGTCGGTGGAGAGGCGCGAGACCGCCGCGCGTTGGGCGCGTCGTTTGTATGACGGTGGCTTTAAACCGGTGTTGTTCAGCGAGGATGTAAATGACGATGTACGCGCGCTAGTGAGGAGGTACAAGGATGGGTGGACGATGACGGACGGAACTGGCTCCGGTGCGGGAATATTTTTGGCTTGGAAGGGGCAGCCGGTTGTTTGGGCCTCCGCGTGGGCTCCTGTAGAGCTAGACGGAGAGAAGACACATGTGTGA 1518 49.67 MDTLFRLVNDLESSNQHSYNNSSSSSKNCSDQNHYYHLQKPQSEECFNNLFMEEEDHFSASSSLDHNHHHQLPQFQCSTTGTSTTSTGTTVPRDEWFSSFTEELNFEFSDDWASTILLQTAIAIVDNNTSRIQQLMWMLNELGSPYGDIDQKLAFYFLQGMFSRVTDSGAKWYGTLVAASEKQSCFESMRRMVLKFEEVSPWMTFGHVASNGWIMEALQGEKKLHIIDMAGNSSFCTQWPTFIEALATQSDQTPHLTLTLLVAAKSDGTIRAHKKLVKEISRRLEKFARLMGVSFRFKPIFHYGDVSQFDFTHLGIKHDEALAVNCAGALRSVAPLDNRRDFLISLFRSLRPRIITVVEEEADLDPHSGVDFVKHIQECLRWFRLYFDSLDGSFPTATDEQFMLERAAGRAVVDLLARVPAESVERRETAARWARRLYDGGFKPVLFSEDVNDDVRALVRRYKDGWTMTDGTGSGAGIFLAWKGQPVVWASAWAPVELDGEKTHV 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30162565 30165850 - CePI673135_02g013270.1 Cec02g1327 196380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g1327 505 Pfam GRAS domain family 115 493 IPR005202 -
Cec02g1327 505 ProSiteProfiles GRAS family profile. 104 494 IPR005202 -
Cec02g1327 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 80 493 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1327 Cec-Chr2:30162565 Cec04g1447 Cec-Chr4:34070231 4.90E-145 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29053 PF03514 GRAS 8.40E-87 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g1327 K27743 - csv:101210294 794.653