Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g1362 | ATGGCACAACAAGACTACCAACAAGCGGCGGCGGCAGGTTTCTTCACGCCTTTCTGCAATGGCTATGATAGATCCTCCACAACCCACCAAGACTCTCAACAACACTACCAACACATAGCCCACCAGATCCGTAAGGAGAAGCTCCGCCTCCAAGGCTTCGACCCACAGCCACATCCACCGTCGTTAGTCGGAATTGACGATGACAACGACGACCAATCCGCTGTCCACCATGTCTACGACTCCACCGGAATTTTATCCGAAATGTTCAATTTCCCTCCGCCTCCACCACCACCGCCACCGCAAACCGACTGGTACGGTAACCGGCAAACAATCAACGCGGCCGACTCGGCTGTCGCCATGCAGCTTTTTCTAATGAACCCGAATCCCCGGTCGCCGTCTCCGCCACCGCCACCACCTTCCTCAACACTCCACATGCTTCTTCCAAACCCATCTTCAGGAGGGTCTTTTGGACAATTCACATGGGGGGTGGTTCCAGAGCAAGAAACAGGTGACCATTCTTCATCAAACCCTAACGAAGGCCGTCTTTCGTTGTCATTGTCATCGTCTTTGGAAGCTGCAAAAGCCGAGGAATTGAGAATGGGTGACAGCACCGACGGGTTACTTTATCATCACCACCATCACCCTCAACATGTACATGTCGGATCAATTGGGTCCTCCAATCCACTGGGAGTCGTCAACTTATTGAGAAACTCAAAATATGTCAAAGCTGCAAAAGAATTATTAGAGGAATTTTGTAGCGTTGGAAGAGGTCAGTTTAAGAAAAATAATAATCATGATAACAAATTTAATAATAAATCAAATTTGCCCTCCAACTCCAATTCCCACGGCGGTGGCGGCGACGGTACCGGAGTTTCTTCCTCTTCGACAAAGGATCATCAGCCAGCTTTGTCAGCAGCTGATAGGATTGACCATCAAAGAAGGAAGGTCAAACTGTTATCTATGCTTGATGAGGTGGATCGAAGATACAACCATTACTGCGAGCAGATGCAAATGGTAGTAAATTCATTCGACGAGGTGATGGGGTTTGGAGCGGCGGTGCCATACACATCGTTGGCGCAAAAGGCGATGTCGAGACATTTCAGGTGTCTAAAGGACGTTATATCAGCGCAGTTGAAGCATAGTTGTGAGATGTTGGGAGAGAAAGATGGAGGAGTAAGTGGAAGAGCCTCAGGAATAACAAAGGGTGAGACTCCAAGGCTAAAGCTCTTGGAGCAATGCCTTAGGCAGCAACGAGCTTTCCACCAAATGGGCATTATGGAACAAGAAGCTTGGCGTCCCCAACGCGGTTTACCCGAACGCTCTGTCAACATCTTACGAGCTTGGCTCTTCGAGCATTTCCTTCATCCGTACCCTAGCGATGCTGATAAACATTTGTTGGCTAGGCAGACTGGTTTGTCAAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAAGCCAAACAAGATGATGATGATGATGATAATACGGATGAAGACACACAAACCAACTCTCAACAAATTACCACTAATAATAATCCTCTTTCACAAACTCCAACGCCGCCTACTTCCTCCGCCGCACCACCACCCCCCTCCTCCTCGACCGCCTCTCCTCCCAAAATACCCGATCACCCTTCACCCTTCTCCGCCGCCGCTACCCACTGCTTTCCGGCTACCCATTATGACTCAGACCTCCACGACTCGTGTCGTCGCCTCACCGTTCTCCCTGCACCTGATCTTCAATTCGGGACCACAACCTCTTCTGCCACGTCTGACATCCCCGGCCCCACCACCCTCATAAGGTTCGGGACCACCGCCGGTGACGTGTCGCTCACACTAGGTTTACGCCATGCCGGAAATATCCCCGATAAAACCTCTTCTTTCTCCCTCAGATCCGAGTTTGGAGGCTGTTAG | 1956 | 50.0 | MAQQDYQQAAAAGFFTPFCNGYDRSSTTHQDSQQHYQHIAHQIRKEKLRLQGFDPQPHPPSLVGIDDDNDDQSAVHHVYDSTGILSEMFNFPPPPPPPPPQTDWYGNRQTINAADSAVAMQLFLMNPNPRSPSPPPPPPSSTLHMLLPNPSSGGSFGQFTWGVVPEQETGDHSSSNPNEGRLSLSLSSSLEAAKAEELRMGDSTDGLLYHHHHHPQHVHVGSIGSSNPLGVVNLLRNSKYVKAAKELLEEFCSVGRGQFKKNNNHDNKFNNKSNLPSNSNSHGGGGDGTGVSSSSTKDHQPALSAADRIDHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDEVMGFGAAVPYTSLAQKAMSRHFRCLKDVISAQLKHSCEMLGEKDGGVSGRASGITKGETPRLKLLEQCLRQQRAFHQMGIMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEAKQDDDDDDNTDEDTQTNSQQITTNNNPLSQTPTPPTSSAAPPPPSSSTASPPKIPDHPSPFSAAATHCFPATHYDSDLHDSCRRLTVLPAPDLQFGTTTSSATSDIPGPTTLIRFGTTAGDVSLTLGLRHAGNIPDKTSSFSLRSEFGGC | 651 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 30712336 | 30718194 | - | CePI673135_02g013620.1 | Cec02g1362 | 196415 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g1362 | 651 | SMART | prehox3 | 229 | 376 | IPR006563 | - | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 259 | 309 | - | - | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 535 | 559 | - | - | |
Cec02g1362 | 651 | Gene3D | - | 434 | 496 | - | - | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 125 | 149 | - | - | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 128 | 144 | - | - | |
Cec02g1362 | 651 | ProSiteProfiles | 'Homeobox' domain profile. | 428 | 491 | IPR001356 | GO:0003677(InterPro) | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 515 | 534 | - | - | |
Cec02g1362 | 651 | CDD | homeodomain | 431 | 492 | IPR001356 | GO:0003677(InterPro) | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 499 | 562 | - | - | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 268 | 301 | - | - | |
Cec02g1362 | 651 | MobiDBLite | consensus disorder prediction | 500 | 514 | - | - | |
Cec02g1362 | 651 | Pfam | Associated with HOX | 235 | 375 | IPR006563 | - | |
Cec02g1362 | 651 | Pfam | Homeobox KN domain | 448 | 487 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cec02g1362 | 651 | SUPERFAMILY | Homeodomain-like | 432 | 498 | IPR009057 | - | |
Cec02g1362 | 651 | SMART | HOX_1 | 431 | 495 | IPR001356 | GO:0003677(InterPro) | |
Cec02g1362 | 651 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 169 | 519 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Cec02g1362 | 651 | FunFam | BEL1-like homeodomain protein 4 | 434 | 496 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0238 | Cec-Chr1:2349830 | Cec02g1362 | Cec-Chr2:30712336 | 2.00E-76 | dispersed | |
Cec02g1362 | Cec-Chr2:30712336 | Cec04g1314 | Cec-Chr4:32760880 | 4.40E-130 | dispersed | |
Cec02g1362 | Cec-Chr2:30712336 | Cec10g1845 | Cec-Chr10:33299423 | 1.10E-67 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29057 | PF07526 | POX | 4.30E-51 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g1362 | - | - | - | 0.0 |